Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 AC063952.2-201ENST00000498792 1227 ntBASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRFAM7AQ494W8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 FP475955.4-201ENST00000623131 1990 ntBASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 TSPY14P-201ENST00000303979 915 ntBASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 AP005242.2-201ENST00000580065 1175 ntBASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 DGCR10-201ENST00000609839 495 ntBASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRFAM7AQ494W8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AC026271.3-201ENST00000571884 352 ntBASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AL121894.2-201ENST00000602977 491 ntBASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 AC005332.8-201ENST00000622750 2735 ntBASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRFAM7AQ494W8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms