Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AC145285.6-201ENST00000604632 637 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 PHGDH-209ENST00000641074 1780 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 GMCL1P1-201ENST00000463439 1581 ntBASIC16■□□□□ 0.15
RSPO1Q2MKA7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16■□□□□ 0.15
RSPO1Q2MKA7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO1Q2MKA7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 AC012306.2-201ENST00000609350 630 ntBASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 AL138966.2-201ENST00000621997 464 ntBASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO1Q2MKA7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 LINC01126-201ENST00000623515 1646 ntBASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 MIR3180-4-201ENST00000582223 153 ntBASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 AC024243.1-201ENST00000609234 778 ntBASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 NOC2LP2-201ENST00000407594 1944 ntBASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RSPO1Q2MKA7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms