Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.62■□□□□ 0.73
DSC1Q08554 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.62■□□□□ 0.73
DSC1Q08554 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DSC1Q08554 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DSC1Q08554 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.62■□□□□ 0.73
DSC1Q08554 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.62■□□□□ 0.73
DSC1Q08554 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DSC1Q08554 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.62■□□□□ 0.73
DSC1Q08554 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DSC1Q08554 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DSC1Q08554 AL499627.1-201ENST00000569373 2188 ntBASIC19.61■□□□□ 0.73
DSC1Q08554 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.61■□□□□ 0.73
DSC1Q08554 SLC25A24-204ENST00000569674 2357 ntBASIC19.61■□□□□ 0.73
DSC1Q08554 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.61■□□□□ 0.73
DSC1Q08554 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 AC079781.3-201ENST00000449110 356 ntBASIC19.61■□□□□ 0.73
DSC1Q08554 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.61■□□□□ 0.73
DSC1Q08554 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.61■□□□□ 0.73
DSC1Q08554 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.61■□□□□ 0.73
DSC1Q08554 AC011840.4-201ENST00000578471 627 ntBASIC19.61■□□□□ 0.73
DSC1Q08554 LINC01711-201ENST00000598340 967 ntBASIC19.61■□□□□ 0.73
DSC1Q08554 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.61■□□□□ 0.73
DSC1Q08554 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.61■□□□□ 0.73
DSC1Q08554 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
DSC1Q08554 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
DSC1Q08554 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DSC1Q08554 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
DSC1Q08554 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.6■□□□□ 0.73
DSC1Q08554 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
DSC1Q08554 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.6■□□□□ 0.73
DSC1Q08554 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.6■□□□□ 0.73
DSC1Q08554 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
DSC1Q08554 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.6■□□□□ 0.73
DSC1Q08554 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DSC1Q08554 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.6■□□□□ 0.73
DSC1Q08554 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 AC099343.3-201ENST00000605834 2503 ntBASIC19.6■□□□□ 0.73
DSC1Q08554 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DSC1Q08554 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
DSC1Q08554 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.59■□□□□ 0.73
DSC1Q08554 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
DSC1Q08554 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
DSC1Q08554 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.59■□□□□ 0.73
DSC1Q08554 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.59■□□□□ 0.73
DSC1Q08554 AC009078.2-202ENST00000463353 338 ntBASIC19.59■□□□□ 0.73
DSC1Q08554 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.59■□□□□ 0.73
DSC1Q08554 AL160237.2-201ENST00000556165 472 ntBASIC19.59■□□□□ 0.73
DSC1Q08554 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
DSC1Q08554 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.59■□□□□ 0.73
DSC1Q08554 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DSC1Q08554 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DSC1Q08554 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms