Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC31.42■■■□□ 2.62
ERCC6Q03468 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC31.42■■■□□ 2.62
ERCC6Q03468 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
ERCC6Q03468 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
ERCC6Q03468 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC31.42■■■□□ 2.62
ERCC6Q03468 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ERCC6Q03468 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC31.41■■■□□ 2.62
ERCC6Q03468 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ERCC6Q03468 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ERCC6Q03468 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ERCC6Q03468 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ERCC6Q03468 HCG4B-203ENST00000450128 991 ntBASIC31.41■■■□□ 2.62
ERCC6Q03468 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC31.41■■■□□ 2.62
ERCC6Q03468 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC31.41■■■□□ 2.62
ERCC6Q03468 AC109322.1-201ENST00000524499 1264 ntBASIC31.41■■■□□ 2.62
ERCC6Q03468 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC31.41■■■□□ 2.62
ERCC6Q03468 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
ERCC6Q03468 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ERCC6Q03468 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ERCC6Q03468 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC31.41■■■□□ 2.62
ERCC6Q03468 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC31.41■■■□□ 2.62
ERCC6Q03468 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC31.41■■■□□ 2.62
ERCC6Q03468 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ERCC6Q03468 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC31.4■■■□□ 2.62
ERCC6Q03468 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ERCC6Q03468 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
ERCC6Q03468 CBR1-202ENST00000399191 838 ntTSL 3 BASIC31.4■■■□□ 2.62
ERCC6Q03468 FAM86GP-201ENST00000448322 971 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 AC093214.1-201ENST00000511688 1107 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
ERCC6Q03468 PDPK2P-202ENST00000562415 1191 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 TK1-204ENST00000590430 683 ntTSL 3 BASIC31.4■■■□□ 2.62
ERCC6Q03468 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC31.4■■■□□ 2.62
ERCC6Q03468 AL022326.1-202ENST00000641533 845 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC31.4■■■□□ 2.62
ERCC6Q03468 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC31.4■■■□□ 2.62
ERCC6Q03468 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
ERCC6Q03468 MED29-202ENST00000594368 1471 ntTSL 2 BASIC31.4■■■□□ 2.62
ERCC6Q03468 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC31.4■■■□□ 2.62
ERCC6Q03468 AC236430.1-201ENST00000402231 743 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 HLA-DRB6-201ENST00000411500 1235 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC31.4■■■□□ 2.62
ERCC6Q03468 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC31.4■■■□□ 2.62
ERCC6Q03468 AC108073.2-201ENST00000464002 357 ntBASIC31.4■■■□□ 2.62
ERCC6Q03468 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
ERCC6Q03468 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
ERCC6Q03468 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ERCC6Q03468 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC31.4■■■□□ 2.62
ERCC6Q03468 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ERCC6Q03468 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ERCC6Q03468 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC31.39■■■□□ 2.62
ERCC6Q03468 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ERCC6Q03468 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
ERCC6Q03468 AC079776.2-201ENST00000641154 1609 ntBASIC31.39■■■□□ 2.62
ERCC6Q03468 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC31.39■■■□□ 2.62
ERCC6Q03468 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC31.39■■■□□ 2.62
ERCC6Q03468 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
ERCC6Q03468 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ERCC6Q03468 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC31.39■■■□□ 2.62
ERCC6Q03468 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC31.39■■■□□ 2.62
ERCC6Q03468 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC31.39■■■□□ 2.62
ERCC6Q03468 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
ERCC6Q03468 SRP19-202ENST00000445150 833 ntTSL 2 BASIC31.39■■■□□ 2.62
ERCC6Q03468 TERF1P3-201ENST00000505638 1227 ntBASIC31.39■■■□□ 2.62
ERCC6Q03468 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
ERCC6Q03468 AL513210.1-201ENST00000629608 234 ntBASIC31.39■■■□□ 2.62
ERCC6Q03468 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
ERCC6Q03468 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ERCC6Q03468 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC31.38■■■□□ 2.61
ERCC6Q03468 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ERCC6Q03468 OR8S1-201ENST00000310194 1080 ntBASIC31.38■■■□□ 2.61
ERCC6Q03468 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ERCC6Q03468 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC31.38■■■□□ 2.61
ERCC6Q03468 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC31.38■■■□□ 2.61
ERCC6Q03468 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ERCC6Q03468 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC31.38■■■□□ 2.61
ERCC6Q03468 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC31.38■■■□□ 2.61
ERCC6Q03468 AC004835.2-201ENST00000603762 682 ntBASIC31.38■■■□□ 2.61
ERCC6Q03468 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ERCC6Q03468 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ERCC6Q03468 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ERCC6Q03468 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
ERCC6Q03468 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
ERCC6Q03468 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC31.37■■■□□ 2.61
ERCC6Q03468 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
ERCC6Q03468 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC31.37■■■□□ 2.61
ERCC6Q03468 MTCL1P1-201ENST00000446207 792 ntBASIC31.37■■■□□ 2.61
ERCC6Q03468 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC31.37■■■□□ 2.61
ERCC6Q03468 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ERCC6Q03468 AC025678.2-201ENST00000562061 970 ntBASIC31.37■■■□□ 2.61
ERCC6Q03468 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC31.37■■■□□ 2.61
ERCC6Q03468 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
ERCC6Q03468 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms