Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CL1P78423 RCC2P3-201ENST00000418112 1537 ntBASIC14.91□□□□□ -0.02
CX3CL1P78423 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CL1P78423 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 AC093525.10-201ENST00000625130 1569 ntBASIC14.9□□□□□ -0.02
CX3CL1P78423 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 NOC2LP2-201ENST00000407594 1944 ntBASIC14.9□□□□□ -0.02
CX3CL1P78423 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CX3CL1P78423 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 CCR12P-201ENST00000446203 998 ntBASIC14.9□□□□□ -0.02
CX3CL1P78423 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CX3CL1P78423 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 Z98044.1-201ENST00000632503 1764 ntBASIC14.9□□□□□ -0.02
CX3CL1P78423 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.9□□□□□ -0.02
CX3CL1P78423 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CL1P78423 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CL1P78423 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CL1P78423 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CX3CL1P78423 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 AL031598.1-201ENST00000561511 1773 ntBASIC14.89□□□□□ -0.03
CX3CL1P78423 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 TSPY17P-201ENST00000450329 467 ntBASIC14.89□□□□□ -0.03
CX3CL1P78423 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.89□□□□□ -0.03
CX3CL1P78423 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 AL023803.3-201ENST00000615559 522 ntBASIC14.89□□□□□ -0.03
CX3CL1P78423 AC116562.4-202ENST00000641738 218 ntBASIC14.89□□□□□ -0.03
CX3CL1P78423 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 AC090164.3-201ENST00000610780 2143 ntBASIC14.89□□□□□ -0.03
CX3CL1P78423 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.89□□□□□ -0.03
CX3CL1P78423 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.89□□□□□ -0.03
CX3CL1P78423 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CL1P78423 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.88□□□□□ -0.03
CX3CL1P78423 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.88□□□□□ -0.03
CX3CL1P78423 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.88□□□□□ -0.03
CX3CL1P78423 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CX3CL1P78423 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.88□□□□□ -0.03
CX3CL1P78423 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
CX3CL1P78423 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.88□□□□□ -0.03
CX3CL1P78423 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.88□□□□□ -0.03
CX3CL1P78423 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.88□□□□□ -0.03
CX3CL1P78423 BX088651.1-201ENST00000540551 451 ntBASIC14.88□□□□□ -0.03
CX3CL1P78423 NAPSB-206ENST00000562112 1266 ntBASIC14.88□□□□□ -0.03
CX3CL1P78423 AL353719.1-201ENST00000566847 864 ntBASIC14.88□□□□□ -0.03
CX3CL1P78423 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.88□□□□□ -0.03
CX3CL1P78423 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CX3CL1P78423 KRT8P9-201ENST00000558927 1449 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms