Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
GABREP78334 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.55■□□□□ 0.4
GABREP78334 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.55■□□□□ 0.4
GABREP78334 RNA5SP419-201ENST00000515908 135 ntBASIC17.55■□□□□ 0.4
GABREP78334 SLC25A1P1-201ENST00000528351 927 ntBASIC17.55■□□□□ 0.4
GABREP78334 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.55■□□□□ 0.4
GABREP78334 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.55■□□□□ 0.4
GABREP78334 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GABREP78334 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GABREP78334 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GABREP78334 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.55■□□□□ 0.4
GABREP78334 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.54■□□□□ 0.4
GABREP78334 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
GABREP78334 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.54■□□□□ 0.4
GABREP78334 AF186996.4-201ENST00000467186 377 ntBASIC17.54■□□□□ 0.4
GABREP78334 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.54■□□□□ 0.4
GABREP78334 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.54■□□□□ 0.4
GABREP78334 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.54■□□□□ 0.4
GABREP78334 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
GABREP78334 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABREP78334 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.53■□□□□ 0.4
GABREP78334 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.53■□□□□ 0.4
GABREP78334 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.53■□□□□ 0.4
GABREP78334 TEX21P-204ENST00000641479 1693 ntBASIC17.53■□□□□ 0.4
GABREP78334 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
GABREP78334 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.53■□□□□ 0.4
GABREP78334 AL031284.1-201ENST00000419297 478 ntBASIC17.53■□□□□ 0.4
GABREP78334 KRT18P67-201ENST00000432816 1264 ntBASIC17.53■□□□□ 0.4
GABREP78334 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.53■□□□□ 0.4
GABREP78334 AC093909.1-201ENST00000504731 1122 ntBASIC17.53■□□□□ 0.4
GABREP78334 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
GABREP78334 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.53■□□□□ 0.4
GABREP78334 AC092865.5-201ENST00000545435 363 ntBASIC17.53■□□□□ 0.4
GABREP78334 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.53■□□□□ 0.4
GABREP78334 AC009065.1-201ENST00000564055 1225 ntBASIC17.53■□□□□ 0.4
GABREP78334 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GABREP78334 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.53■□□□□ 0.4
GABREP78334 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.53■□□□□ 0.4
GABREP78334 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABREP78334 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GABREP78334 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABREP78334 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
GABREP78334 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.52■□□□□ 0.4
GABREP78334 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
GABREP78334 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.52■□□□□ 0.4
GABREP78334 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABREP78334 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABREP78334 KRT8P32-201ENST00000512863 1461 ntBASIC17.52■□□□□ 0.4
GABREP78334 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABREP78334 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
GABREP78334 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.52■□□□□ 0.4
GABREP78334 POM121L3P-201ENST00000419331 1163 ntBASIC17.52■□□□□ 0.4
GABREP78334 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABREP78334 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.52■□□□□ 0.4
GABREP78334 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.52■□□□□ 0.4
GABREP78334 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.52■□□□□ 0.4
GABREP78334 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.52■□□□□ 0.4
GABREP78334 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.52■□□□□ 0.4
GABREP78334 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.52■□□□□ 0.4
GABREP78334 AL591684.3-201ENST00000605187 298 ntBASIC17.52■□□□□ 0.4
GABREP78334 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABREP78334 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GABREP78334 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.52■□□□□ 0.39
GABREP78334 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GABREP78334 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.52■□□□□ 0.39
GABREP78334 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms