Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42P60953 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42P60953 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42P60953 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42P60953 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
CDC42P60953 KRT8P41-201ENST00000533985 1514 ntBASIC16.91■□□□□ 0.3
CDC42P60953 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CDC42P60953 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42P60953 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42P60953 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 MIR663A-201ENST00000385250 93 ntBASIC16.91■□□□□ 0.3
CDC42P60953 MIR935-201ENST00000401179 91 ntBASIC16.91■□□□□ 0.3
CDC42P60953 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDC42P60953 C1QL1P1-201ENST00000568105 661 ntBASIC16.91■□□□□ 0.3
CDC42P60953 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42P60953 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDC42P60953 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42P60953 AC008556.1-201ENST00000610908 2040 ntBASIC16.91■□□□□ 0.3
CDC42P60953 FLJ13224-201ENST00000313737 1514 ntBASIC16.91■□□□□ 0.3
CDC42P60953 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDC42P60953 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDC42P60953 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42P60953 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC42P60953 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42P60953 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42P60953 AC080038.1-201ENST00000611274 1154 ntBASIC16.9■□□□□ 0.3
CDC42P60953 AC073111.5-205ENST00000641717 521 ntBASIC16.9■□□□□ 0.3
CDC42P60953 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42P60953 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CDC42P60953 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CDC42P60953 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 AC012317.2-201ENST00000623305 2251 ntBASIC16.9■□□□□ 0.3
CDC42P60953 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDC42P60953 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42P60953 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.89■□□□□ 0.3
CDC42P60953 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDC42P60953 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDC42P60953 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CDC42P60953 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42P60953 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDC42P60953 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC42P60953 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC42P60953 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42P60953 AC097658.1-201ENST00000475555 843 ntBASIC16.89■□□□□ 0.29
CDC42P60953 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42P60953 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42P60953 PRKY-204ENST00000533551 1019 ntBASIC16.89■□□□□ 0.29
CDC42P60953 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42P60953 AC008687.6-201ENST00000596318 630 ntBASIC16.89■□□□□ 0.29
CDC42P60953 AL137784.2-201ENST00000607332 1000 ntBASIC16.89■□□□□ 0.29
CDC42P60953 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC42P60953 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDC42P60953 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42P60953 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.88■□□□□ 0.29
CDC42P60953 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDC42P60953 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 KRT8P3-201ENST00000519669 1449 ntBASIC16.88■□□□□ 0.29
CDC42P60953 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42P60953 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms