Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.81■■□□□ 1.08
RHBDL3P58872 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RHBDL3P58872 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDL3P58872 AC079781.3-201ENST00000449110 356 ntBASIC21.81■■□□□ 1.08
RHBDL3P58872 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RHBDL3P58872 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.81■■□□□ 1.08
RHBDL3P58872 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.81■■□□□ 1.08
RHBDL3P58872 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.81■■□□□ 1.08
RHBDL3P58872 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.81■■□□□ 1.08
RHBDL3P58872 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDL3P58872 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.81■■□□□ 1.08
RHBDL3P58872 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.81■■□□□ 1.08
RHBDL3P58872 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDL3P58872 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDL3P58872 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDL3P58872 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.81■■□□□ 1.08
RHBDL3P58872 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.81■■□□□ 1.08
RHBDL3P58872 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDL3P58872 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.8■■□□□ 1.08
RHBDL3P58872 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RHBDL3P58872 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RHBDL3P58872 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.8■■□□□ 1.08
RHBDL3P58872 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.8■■□□□ 1.08
RHBDL3P58872 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.8■■□□□ 1.08
RHBDL3P58872 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.8■■□□□ 1.08
RHBDL3P58872 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.8■■□□□ 1.08
RHBDL3P58872 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RHBDL3P58872 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 KRT8P10-201ENST00000450021 1447 ntBASIC21.8■■□□□ 1.08
RHBDL3P58872 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.8■■□□□ 1.08
RHBDL3P58872 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDL3P58872 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.79■■□□□ 1.08
RHBDL3P58872 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.79■■□□□ 1.08
RHBDL3P58872 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 AKR1C7P-201ENST00000305623 895 ntBASIC21.79■■□□□ 1.08
RHBDL3P58872 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RHBDL3P58872 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.79■■□□□ 1.08
RHBDL3P58872 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 AC009078.2-202ENST00000463353 338 ntBASIC21.79■■□□□ 1.08
RHBDL3P58872 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.79■■□□□ 1.08
RHBDL3P58872 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.79■■□□□ 1.08
RHBDL3P58872 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.79■■□□□ 1.08
RHBDL3P58872 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.79■■□□□ 1.08
RHBDL3P58872 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.79■■□□□ 1.08
RHBDL3P58872 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDL3P58872 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.78■■□□□ 1.08
RHBDL3P58872 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 LINC01126-201ENST00000623515 1646 ntBASIC21.78■■□□□ 1.08
RHBDL3P58872 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.78■■□□□ 1.08
RHBDL3P58872 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RHBDL3P58872 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RHBDL3P58872 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.78■■□□□ 1.08
RHBDL3P58872 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.78■■□□□ 1.08
RHBDL3P58872 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.78■■□□□ 1.08
RHBDL3P58872 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.78■■□□□ 1.08
RHBDL3P58872 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RHBDL3P58872 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDL3P58872 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 SLC25A24-204ENST00000569674 2357 ntBASIC21.77■■□□□ 1.08
RHBDL3P58872 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.77■■□□□ 1.08
RHBDL3P58872 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.77■■□□□ 1.08
RHBDL3P58872 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
RHBDL3P58872 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RHBDL3P58872 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RHBDL3P58872 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.77■■□□□ 1.08
RHBDL3P58872 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.77■■□□□ 1.08
RHBDL3P58872 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.77■■□□□ 1.08
RHBDL3P58872 KRT16P4-201ENST00000453883 522 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms