Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.31■■□□□ 1
HMGCS2P54868 AL591684.3-201ENST00000605187 298 ntBASIC21.31■■□□□ 1
HMGCS2P54868 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.31■■□□□ 1
HMGCS2P54868 AC006538.3-201ENST00000612495 578 ntBASIC21.31■■□□□ 1
HMGCS2P54868 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGCS2P54868 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCS2P54868 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCS2P54868 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGCS2P54868 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGCS2P54868 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.31■■□□□ 1
HMGCS2P54868 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCS2P54868 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HMGCS2P54868 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HMGCS2P54868 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HMGCS2P54868 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HMGCS2P54868 MIR5100-201ENST00000579544 119 ntBASIC21.3■■□□□ 1
HMGCS2P54868 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HMGCS2P54868 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.3■■□□□ 1
HMGCS2P54868 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCS2P54868 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HMGCS2P54868 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HMGCS2P54868 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.29■■□□□ 1
HMGCS2P54868 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.29■■□□□ 1
HMGCS2P54868 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.29■■□□□ 1
HMGCS2P54868 FAM197Y8-203ENST00000450145 560 ntBASIC21.29■■□□□ 1
HMGCS2P54868 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.29■■□□□ 1
HMGCS2P54868 AP001005.1-201ENST00000571755 1248 ntBASIC21.29■■□□□ 1
HMGCS2P54868 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.29■■□□□ 1
HMGCS2P54868 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HMGCS2P54868 AC064862.7-201ENST00000604520 867 ntBASIC21.29■■□□□ 1
HMGCS2P54868 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HMGCS2P54868 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.29■■□□□ 1
HMGCS2P54868 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HMGCS2P54868 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCS2P54868 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.29■■□□□ 1
HMGCS2P54868 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.28■■□□□ 1
HMGCS2P54868 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 MIR149-201ENST00000384879 89 ntBASIC21.28■■□□□ 1
HMGCS2P54868 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.28■■□□□ 1
HMGCS2P54868 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HMGCS2P54868 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.28■■□□□ 1
HMGCS2P54868 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.28■■□□□ 1
HMGCS2P54868 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.28■■□□□ 1
HMGCS2P54868 AL773604.1-201ENST00000617417 272 ntBASIC21.28■■□□□ 1
HMGCS2P54868 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
HMGCS2P54868 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCS2P54868 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGCS2P54868 AL049812.1-201ENST00000432563 2267 ntBASIC21.27■■□□□ 1
HMGCS2P54868 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.27■■□□□ 1
HMGCS2P54868 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGCS2P54868 AL161938.1-201ENST00000569833 2180 ntBASIC21.27■■□□□ 1
HMGCS2P54868 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCS2P54868 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGCS2P54868 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCS2P54868 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HMGCS2P54868 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms