Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.93■□□□□ 0.46
PDX1P52945 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.93■□□□□ 0.46
PDX1P52945 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDX1P52945 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDX1P52945 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.93■□□□□ 0.46
PDX1P52945 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDX1P52945 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDX1P52945 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PDX1P52945 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 AL109659.2-201ENST00000606809 1674 ntBASIC17.93■□□□□ 0.46
PDX1P52945 TNXA-203ENST00000507684 2038 ntBASIC17.93■□□□□ 0.46
PDX1P52945 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 RCC2P3-201ENST00000418112 1537 ntBASIC17.93■□□□□ 0.46
PDX1P52945 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 AC004870.1-201ENST00000315132 882 ntBASIC17.92■□□□□ 0.46
PDX1P52945 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 NUS1P1-201ENST00000446295 882 ntBASIC17.92■□□□□ 0.46
PDX1P52945 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 AC141586.3-201ENST00000562166 1838 ntBASIC17.92■□□□□ 0.46
PDX1P52945 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 AC008556.1-201ENST00000610908 2040 ntBASIC17.92■□□□□ 0.46
PDX1P52945 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
PDX1P52945 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDX1P52945 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.92■□□□□ 0.46
PDX1P52945 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDX1P52945 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.91■□□□□ 0.46
PDX1P52945 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PDX1P52945 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.91■□□□□ 0.46
PDX1P52945 PVRIG2P-201ENST00000435460 978 ntBASIC17.91■□□□□ 0.46
PDX1P52945 DRAXINP1-201ENST00000437611 948 ntBASIC17.91■□□□□ 0.46
PDX1P52945 KRT17P6-201ENST00000453795 1220 ntBASIC17.91■□□□□ 0.46
PDX1P52945 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.91■□□□□ 0.46
PDX1P52945 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.91■□□□□ 0.46
PDX1P52945 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.91■□□□□ 0.46
PDX1P52945 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.91■□□□□ 0.46
PDX1P52945 IFNL4P1-201ENST00000607083 540 ntBASIC17.91■□□□□ 0.46
PDX1P52945 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 KRT18P1-202ENST00000452408 1331 ntBASIC17.91■□□□□ 0.46
PDX1P52945 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.91■□□□□ 0.46
PDX1P52945 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDX1P52945 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.9■□□□□ 0.46
PDX1P52945 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 AL161938.1-201ENST00000569833 2180 ntBASIC17.9■□□□□ 0.46
PDX1P52945 AC120498.9-201ENST00000339021 3867 ntBASIC17.9■□□□□ 0.46
PDX1P52945 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDX1P52945 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms