Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC117947.1-201ENST00000427448 529 ntBASIC19.05■□□□□ 0.64
NEK3P51956 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
NEK3P51956 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.05■□□□□ 0.64
NEK3P51956 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NEK3P51956 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NEK3P51956 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NEK3P51956 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK3P51956 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.04■□□□□ 0.64
NEK3P51956 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.04■□□□□ 0.64
NEK3P51956 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NEK3P51956 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NEK3P51956 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 KRT8P45-201ENST00000414328 1447 ntBASIC19.04■□□□□ 0.64
NEK3P51956 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK3P51956 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.04■□□□□ 0.64
NEK3P51956 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NEK3P51956 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.04■□□□□ 0.64
NEK3P51956 COX11P1-201ENST00000489116 835 ntBASIC19.04■□□□□ 0.64
NEK3P51956 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.04■□□□□ 0.64
NEK3P51956 AC139887.4-201ENST00000607877 719 ntBASIC19.04■□□□□ 0.64
NEK3P51956 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NEK3P51956 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NEK3P51956 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK3P51956 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
NEK3P51956 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.04■□□□□ 0.64
NEK3P51956 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK3P51956 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK3P51956 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.03■□□□□ 0.64
NEK3P51956 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 AC068880.1-201ENST00000507289 2297 ntBASIC19.03■□□□□ 0.64
NEK3P51956 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.03■□□□□ 0.64
NEK3P51956 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.03■□□□□ 0.64
NEK3P51956 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.03■□□□□ 0.64
NEK3P51956 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.03■□□□□ 0.64
NEK3P51956 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.03■□□□□ 0.64
NEK3P51956 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK3P51956 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.03■□□□□ 0.64
NEK3P51956 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK3P51956 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.03■□□□□ 0.64
NEK3P51956 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK3P51956 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NEK3P51956 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
NEK3P51956 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
NEK3P51956 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 ARMC10P1-201ENST00000313754 855 ntBASIC19.02■□□□□ 0.64
NEK3P51956 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NEK3P51956 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.02■□□□□ 0.64
NEK3P51956 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK3P51956 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK3P51956 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms