Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN3P51790 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 MIR149-201ENST00000384879 89 ntBASIC20.28■□□□□ 0.84
CLCN3P51790 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN3P51790 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN3P51790 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.28■□□□□ 0.84
CLCN3P51790 LINC00265-3P-201ENST00000447588 903 ntBASIC20.28■□□□□ 0.84
CLCN3P51790 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN3P51790 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN3P51790 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.28■□□□□ 0.84
CLCN3P51790 PRELID1P1-202ENST00000567272 903 ntBASIC20.28■□□□□ 0.84
CLCN3P51790 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN3P51790 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 MYLKP1-201ENST00000509077 1580 ntBASIC20.28■□□□□ 0.84
CLCN3P51790 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLCN3P51790 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CLCN3P51790 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLCN3P51790 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN3P51790 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN3P51790 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLCN3P51790 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN3P51790 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLCN3P51790 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CLCN3P51790 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN3P51790 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN3P51790 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 AC009102.3-201ENST00000623118 1491 ntBASIC20.27■□□□□ 0.84
CLCN3P51790 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN3P51790 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.27■□□□□ 0.84
CLCN3P51790 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN3P51790 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.27■□□□□ 0.84
CLCN3P51790 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN3P51790 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLCN3P51790 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.83
CLCN3P51790 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLCN3P51790 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 DRAXINP1-201ENST00000437611 948 ntBASIC20.26■□□□□ 0.83
CLCN3P51790 TOB2P1-201ENST00000469761 992 ntBASIC20.26■□□□□ 0.83
CLCN3P51790 AP000867.3-201ENST00000524675 377 ntBASIC20.26■□□□□ 0.83
CLCN3P51790 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN3P51790 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN3P51790 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 AC112777.1-201ENST00000540175 1423 ntBASIC20.26■□□□□ 0.83
CLCN3P51790 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN3P51790 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN3P51790 AC005082.1-201ENST00000413042 2259 ntBASIC20.25■□□□□ 0.83
CLCN3P51790 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN3P51790 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLCN3P51790 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.25■□□□□ 0.83
CLCN3P51790 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.25■□□□□ 0.83
CLCN3P51790 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLCN3P51790 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN3P51790 IGHV3-41-201ENST00000613121 348 ntBASIC20.25■□□□□ 0.83
CLCN3P51790 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 SDHAP2-201ENST00000455183 2001 ntBASIC20.25■□□□□ 0.83
CLCN3P51790 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLCN3P51790 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN3P51790 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN3P51790 AL353692.3-201ENST00000407031 1396 ntBASIC20.24■□□□□ 0.83
CLCN3P51790 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLCN3P51790 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN3P51790 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms