Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HTR3AP46098 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.07■□□□□ 0.32
HTR3AP46098 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HTR3AP46098 SLC25A1P2-201ENST00000430693 912 ntBASIC17.07■□□□□ 0.32
HTR3AP46098 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.07■□□□□ 0.32
HTR3AP46098 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR3AP46098 FITM1-202ENST00000559294 800 ntBASIC17.07■□□□□ 0.32
HTR3AP46098 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR3AP46098 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.07■□□□□ 0.32
HTR3AP46098 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 AC068587.9-201ENST00000641814 219 ntBASIC17.07■□□□□ 0.32
HTR3AP46098 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HTR3AP46098 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
HTR3AP46098 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 AL031598.1-201ENST00000561511 1773 ntBASIC17.07■□□□□ 0.32
HTR3AP46098 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR3AP46098 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HTR3AP46098 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR3AP46098 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR3AP46098 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.06■□□□□ 0.32
HTR3AP46098 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.06■□□□□ 0.32
HTR3AP46098 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR3AP46098 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR3AP46098 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HTR3AP46098 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR3AP46098 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
HTR3AP46098 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HTR3AP46098 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR3AP46098 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR3AP46098 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTR3AP46098 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR3AP46098 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 TSPY17P-201ENST00000450329 467 ntBASIC17.05■□□□□ 0.32
HTR3AP46098 AC093827.2-201ENST00000512654 315 ntBASIC17.05■□□□□ 0.32
HTR3AP46098 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.05■□□□□ 0.32
HTR3AP46098 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR3AP46098 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR3AP46098 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR3AP46098 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR3AP46098 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HTR3AP46098 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR3AP46098 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR3AP46098 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR3AP46098 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.04■□□□□ 0.32
HTR3AP46098 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR3AP46098 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR3AP46098 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR3AP46098 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR3AP46098 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR3AP46098 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms