Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CEACAM3P40198 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CEACAM3P40198 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
CEACAM3P40198 KRT18P23-201ENST00000435622 1283 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 AC009947.2-201ENST00000444014 672 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.09■□□□□ 0.01
CEACAM3P40198 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.09■□□□□ 0.01
CEACAM3P40198 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.09■□□□□ 0.01
CEACAM3P40198 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.09■□□□□ 0.01
CEACAM3P40198 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.09■□□□□ 0.01
CEACAM3P40198 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.09■□□□□ 0.01
CEACAM3P40198 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.09■□□□□ 0.01
CEACAM3P40198 AC140113.3-201ENST00000605663 199 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 AC112497.1-201ENST00000624824 639 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 AC141257.4-201ENST00000634557 245 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 AC136944.6-201ENST00000634818 245 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CEACAM3P40198 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CEACAM3P40198 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.09■□□□□ 0.01
CEACAM3P40198 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CEACAM3P40198 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CEACAM3P40198 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CEACAM3P40198 ANO7L1-203ENST00000602586 1720 ntBASIC15.09■□□□□ 0.01
CEACAM3P40198 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CEACAM3P40198 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CEACAM3P40198 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CEACAM3P40198 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.08■□□□□ 0.01
CEACAM3P40198 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 AC098818.2-201ENST00000564925 2320 ntBASIC15.08■□□□□ 0
CEACAM3P40198 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CEACAM3P40198 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.08■□□□□ 0
CEACAM3P40198 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.08■□□□□ 0
CEACAM3P40198 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.08■□□□□ 0
CEACAM3P40198 KRT18P41-201ENST00000518924 1277 ntBASIC15.08■□□□□ 0
CEACAM3P40198 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.08■□□□□ 0
CEACAM3P40198 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CEACAM3P40198 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.08■□□□□ 0
CEACAM3P40198 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CEACAM3P40198 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.08■□□□□ 0
CEACAM3P40198 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.08■□□□□ 0
CEACAM3P40198 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CEACAM3P40198 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CEACAM3P40198 AL031598.1-201ENST00000561511 1773 ntBASIC15.08■□□□□ 0
CEACAM3P40198 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CEACAM3P40198 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CEACAM3P40198 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.08■□□□□ 0
CEACAM3P40198 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.07■□□□□ 0
CEACAM3P40198 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 TERF1P1-201ENST00000311003 1181 ntBASIC15.07■□□□□ 0
CEACAM3P40198 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 BX664615.1-201ENST00000443558 458 ntBASIC15.07■□□□□ 0
CEACAM3P40198 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.07■□□□□ 0
CEACAM3P40198 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CEACAM3P40198 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.07■□□□□ 0
CEACAM3P40198 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.07■□□□□ 0
CEACAM3P40198 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CEACAM3P40198 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CEACAM3P40198 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.06■□□□□ 0
CEACAM3P40198 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.06■□□□□ 0
CEACAM3P40198 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CEACAM3P40198 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms