Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GRIK1P39086 AL162741.1-201ENST00000565563 1558 ntBASIC19.47■□□□□ 0.71
GRIK1P39086 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.47■□□□□ 0.71
GRIK1P39086 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GRIK1P39086 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.47■□□□□ 0.71
GRIK1P39086 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GRIK1P39086 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.46■□□□□ 0.71
GRIK1P39086 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 MIR662-201ENST00000384847 95 ntBASIC19.46■□□□□ 0.71
GRIK1P39086 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.46■□□□□ 0.71
GRIK1P39086 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
GRIK1P39086 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.46■□□□□ 0.71
GRIK1P39086 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.46■□□□□ 0.71
GRIK1P39086 AC011498.5-201ENST00000592027 486 ntBASIC19.46■□□□□ 0.71
GRIK1P39086 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
GRIK1P39086 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GRIK1P39086 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.46■□□□□ 0.71
GRIK1P39086 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 HCG11-201ENST00000411553 5696 ntBASIC19.45■□□□□ 0.7
GRIK1P39086 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GRIK1P39086 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.45■□□□□ 0.7
GRIK1P39086 AC112777.1-201ENST00000540175 1423 ntBASIC19.45■□□□□ 0.7
GRIK1P39086 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.45■□□□□ 0.7
GRIK1P39086 AC099343.3-201ENST00000605834 2503 ntBASIC19.45■□□□□ 0.7
GRIK1P39086 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.45■□□□□ 0.7
GRIK1P39086 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.45■□□□□ 0.7
GRIK1P39086 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.45■□□□□ 0.7
GRIK1P39086 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GRIK1P39086 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GRIK1P39086 AL499627.1-201ENST00000569373 2188 ntBASIC19.44■□□□□ 0.7
GRIK1P39086 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GRIK1P39086 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
GRIK1P39086 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.44■□□□□ 0.7
GRIK1P39086 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GRIK1P39086 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GRIK1P39086 MYLKP1-201ENST00000509077 1580 ntBASIC19.44■□□□□ 0.7
GRIK1P39086 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.44■□□□□ 0.7
GRIK1P39086 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GRIK1P39086 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.43■□□□□ 0.7
GRIK1P39086 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.43■□□□□ 0.7
GRIK1P39086 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GRIK1P39086 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
GRIK1P39086 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GRIK1P39086 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.43■□□□□ 0.7
GRIK1P39086 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GRIK1P39086 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GRIK1P39086 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.43■□□□□ 0.7
GRIK1P39086 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms