Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
COL15A1P39059 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 IL9RP2-201ENST00000423948 1312 ntBASIC23.39■■□□□ 1.33
COL15A1P39059 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
COL15A1P39059 PMS2P1-201ENST00000431037 1228 ntBASIC23.39■■□□□ 1.33
COL15A1P39059 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.39■■□□□ 1.33
COL15A1P39059 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL15A1P39059 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.38■■□□□ 1.33
COL15A1P39059 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.38■■□□□ 1.33
COL15A1P39059 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.38■■□□□ 1.33
COL15A1P39059 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 AL357033.4-201ENST00000617703 1807 ntBASIC23.38■■□□□ 1.33
COL15A1P39059 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.38■■□□□ 1.33
COL15A1P39059 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
COL15A1P39059 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
COL15A1P39059 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 AP000593.1-201ENST00000393668 712 ntBASIC23.38■■□□□ 1.33
COL15A1P39059 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.38■■□□□ 1.33
COL15A1P39059 KRT18P41-201ENST00000518924 1277 ntBASIC23.38■■□□□ 1.33
COL15A1P39059 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.38■■□□□ 1.33
COL15A1P39059 SLC25A1P1-201ENST00000528351 927 ntBASIC23.38■■□□□ 1.33
COL15A1P39059 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL15A1P39059 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL15A1P39059 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
COL15A1P39059 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL15A1P39059 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
COL15A1P39059 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL15A1P39059 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.37■■□□□ 1.33
COL15A1P39059 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
COL15A1P39059 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL15A1P39059 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL15A1P39059 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL15A1P39059 AC096582.2-201ENST00000510860 516 ntBASIC23.37■■□□□ 1.33
COL15A1P39059 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.37■■□□□ 1.33
COL15A1P39059 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL15A1P39059 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL15A1P39059 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL15A1P39059 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.37■■□□□ 1.33
COL15A1P39059 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.36■■□□□ 1.33
COL15A1P39059 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.36■■□□□ 1.33
COL15A1P39059 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.36■■□□□ 1.33
COL15A1P39059 KRT18P67-201ENST00000432816 1264 ntBASIC23.36■■□□□ 1.33
COL15A1P39059 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.36■■□□□ 1.33
COL15A1P39059 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.36■■□□□ 1.33
COL15A1P39059 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.36■■□□□ 1.33
COL15A1P39059 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
COL15A1P39059 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
COL15A1P39059 AC064862.7-201ENST00000604520 867 ntBASIC23.36■■□□□ 1.33
COL15A1P39059 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.36■■□□□ 1.33
COL15A1P39059 AC114341.1-201ENST00000618070 349 ntBASIC23.36■■□□□ 1.33
COL15A1P39059 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.36■■□□□ 1.33
COL15A1P39059 AF228730.7-201ENST00000641842 219 ntBASIC23.36■■□□□ 1.33
COL15A1P39059 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL15A1P39059 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.35■■□□□ 1.33
COL15A1P39059 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 AL049812.1-201ENST00000432563 2267 ntBASIC23.35■■□□□ 1.33
COL15A1P39059 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.35■■□□□ 1.33
COL15A1P39059 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
COL15A1P39059 POM121L3P-201ENST00000419331 1163 ntBASIC23.35■■□□□ 1.33
COL15A1P39059 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.35■■□□□ 1.33
COL15A1P39059 FAM197Y8-203ENST00000450145 560 ntBASIC23.35■■□□□ 1.33
COL15A1P39059 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.35■■□□□ 1.33
COL15A1P39059 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
COL15A1P39059 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
COL15A1P39059 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
COL15A1P39059 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL15A1P39059 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
COL15A1P39059 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
COL15A1P39059 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL15A1P39059 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
COL15A1P39059 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.34■■□□□ 1.33
COL15A1P39059 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms