Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT9P35527 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KRT9P35527 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT9P35527 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT9P35527 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT9P35527 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT9P35527 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT9P35527 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 AC093677.2-201ENST00000600169 1863 ntBASIC20.24■□□□□ 0.83
KRT9P35527 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT9P35527 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KRT9P35527 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 ESPNP-201ENST00000270691 2015 ntBASIC20.24■□□□□ 0.83
KRT9P35527 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT9P35527 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT9P35527 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT9P35527 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT9P35527 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRT9P35527 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT9P35527 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KRT9P35527 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT9P35527 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRT9P35527 AC012618.2-201ENST00000428058 849 ntBASIC20.23■□□□□ 0.83
KRT9P35527 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRT9P35527 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT9P35527 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.23■□□□□ 0.83
KRT9P35527 AC233702.5-201ENST00000584107 538 ntBASIC20.23■□□□□ 0.83
KRT9P35527 MIR6786-201ENST00000616843 113 ntBASIC20.23■□□□□ 0.83
KRT9P35527 AC130371.2-201ENST00000619443 611 ntBASIC20.23■□□□□ 0.83
KRT9P35527 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT9P35527 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT9P35527 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT9P35527 FSCN1P1-201ENST00000568912 1481 ntBASIC20.23■□□□□ 0.83
KRT9P35527 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT9P35527 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT9P35527 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT9P35527 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRT9P35527 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KRT9P35527 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT9P35527 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT9P35527 AC011506.1-201ENST00000474329 610 ntBASIC20.22■□□□□ 0.83
KRT9P35527 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT9P35527 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT9P35527 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT9P35527 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KRT9P35527 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
KRT9P35527 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
KRT9P35527 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT9P35527 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT9P35527 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT9P35527 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 FAM207BP-201ENST00000447172 505 ntBASIC20.21■□□□□ 0.83
KRT9P35527 B3GAT3P1-201ENST00000471720 806 ntBASIC20.21■□□□□ 0.83
KRT9P35527 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT9P35527 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT9P35527 AL049637.2-201ENST00000641778 930 ntBASIC20.21■□□□□ 0.83
KRT9P35527 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT9P35527 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms