Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
HOXC8P31273 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HOXC8P31273 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.13■□□□□ 0.81
HOXC8P31273 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
HOXC8P31273 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.13■□□□□ 0.81
HOXC8P31273 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
HOXC8P31273 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.13■□□□□ 0.81
HOXC8P31273 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.13■□□□□ 0.81
HOXC8P31273 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.13■□□□□ 0.81
HOXC8P31273 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.13■□□□□ 0.81
HOXC8P31273 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
HOXC8P31273 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HOXC8P31273 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC8P31273 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.13■□□□□ 0.81
HOXC8P31273 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HOXC8P31273 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.12■□□□□ 0.81
HOXC8P31273 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.12■□□□□ 0.81
HOXC8P31273 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.12■□□□□ 0.81
HOXC8P31273 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.12■□□□□ 0.81
HOXC8P31273 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.12■□□□□ 0.81
HOXC8P31273 AL591684.3-201ENST00000605187 298 ntBASIC20.12■□□□□ 0.81
HOXC8P31273 BX640515.1-201ENST00000617215 977 ntBASIC20.12■□□□□ 0.81
HOXC8P31273 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HOXC8P31273 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.12■□□□□ 0.81
HOXC8P31273 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC8P31273 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.12■□□□□ 0.81
HOXC8P31273 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 AC073130.3-201ENST00000624389 2278 ntBASIC20.11■□□□□ 0.81
HOXC8P31273 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.11■□□□□ 0.81
HOXC8P31273 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 AC096582.2-201ENST00000510860 516 ntBASIC20.11■□□□□ 0.81
HOXC8P31273 AL671883.3-201ENST00000603274 991 ntBASIC20.11■□□□□ 0.81
HOXC8P31273 AC009154.2-201ENST00000621177 724 ntBASIC20.11■□□□□ 0.81
HOXC8P31273 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HOXC8P31273 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC8P31273 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.11■□□□□ 0.81
HOXC8P31273 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.11■□□□□ 0.81
HOXC8P31273 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.1■□□□□ 0.81
HOXC8P31273 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HOXC8P31273 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.1■□□□□ 0.81
HOXC8P31273 AL138831.2-201ENST00000606564 490 ntBASIC20.1■□□□□ 0.81
HOXC8P31273 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HOXC8P31273 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.1■□□□□ 0.81
HOXC8P31273 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HOXC8P31273 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.1■□□□□ 0.81
HOXC8P31273 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC8P31273 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.1■□□□□ 0.81
HOXC8P31273 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HOXC8P31273 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC8P31273 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.09■□□□□ 0.81
HOXC8P31273 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms