Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF4P23510 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF4P23510 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 RNF152P1-201ENST00000397754 604 ntBASIC15.82■□□□□ 0.12
TNFSF4P23510 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFSF4P23510 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFSF4P23510 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF4P23510 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF4P23510 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF4P23510 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF4P23510 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF4P23510 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF4P23510 Z98044.1-201ENST00000632503 1764 ntBASIC15.82■□□□□ 0.12
TNFSF4P23510 AL357033.4-201ENST00000617703 1807 ntBASIC15.82■□□□□ 0.12
TNFSF4P23510 AC006333.2-201ENST00000607957 2099 ntBASIC15.82■□□□□ 0.12
TNFSF4P23510 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF4P23510 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TNFSF4P23510 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF4P23510 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF4P23510 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 YBX1P2-201ENST00000489612 999 ntBASIC15.81■□□□□ 0.12
TNFSF4P23510 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 AL049597.2-201ENST00000565575 961 ntBASIC15.81■□□□□ 0.12
TNFSF4P23510 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 HOXB1-202ENST00000577092 1414 ntBASIC15.81■□□□□ 0.12
TNFSF4P23510 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 AC139887.4-201ENST00000607877 719 ntBASIC15.81■□□□□ 0.12
TNFSF4P23510 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF4P23510 BX323043.1-201ENST00000641006 1765 ntBASIC15.81■□□□□ 0.12
TNFSF4P23510 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF4P23510 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.8■□□□□ 0.12
TNFSF4P23510 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TNFSF4P23510 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TNFSF4P23510 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.8■□□□□ 0.12
TNFSF4P23510 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFSF4P23510 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 AC112777.1-201ENST00000540175 1423 ntBASIC15.8■□□□□ 0.12
TNFSF4P23510 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 HOMER2P1-201ENST00000455653 964 ntBASIC15.8■□□□□ 0.12
TNFSF4P23510 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFSF4P23510 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFSF4P23510 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF4P23510 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFSF4P23510 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF4P23510 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TNFSF4P23510 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TNFSF4P23510 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.8■□□□□ 0.12
TNFSF4P23510 AL023973.1-201ENST00000624619 620 ntBASIC15.8■□□□□ 0.12
TNFSF4P23510 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms