Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 BX088651.1-201ENST00000540551 451 ntBASIC17.12■□□□□ 0.33
PRKCAP17252 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 AC083906.6-201ENST00000641366 219 ntBASIC17.12■□□□□ 0.33
PRKCAP17252 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 KRT8P9-201ENST00000558927 1449 ntBASIC17.12■□□□□ 0.33
PRKCAP17252 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRKCAP17252 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 AL512353.2-201ENST00000448759 1962 ntBASIC17.11■□□□□ 0.33
PRKCAP17252 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.11■□□□□ 0.33
PRKCAP17252 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRKCAP17252 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRKCAP17252 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.11■□□□□ 0.33
PRKCAP17252 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.11■□□□□ 0.33
PRKCAP17252 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRKCAP17252 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PRKCAP17252 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.11■□□□□ 0.33
PRKCAP17252 SLC25A1P2-201ENST00000430693 912 ntBASIC17.11■□□□□ 0.33
PRKCAP17252 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.11■□□□□ 0.33
PRKCAP17252 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.11■□□□□ 0.33
PRKCAP17252 C2orf69P3-201ENST00000565542 1120 ntBASIC17.11■□□□□ 0.33
PRKCAP17252 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
PRKCAP17252 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.11■□□□□ 0.33
PRKCAP17252 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.11■□□□□ 0.33
PRKCAP17252 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRKCAP17252 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PRKCAP17252 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
PRKCAP17252 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRKCAP17252 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.1■□□□□ 0.33
PRKCAP17252 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 AL023803.3-201ENST00000615559 522 ntBASIC17.1■□□□□ 0.33
PRKCAP17252 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.1■□□□□ 0.33
PRKCAP17252 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 KRT8P32-201ENST00000512863 1461 ntBASIC17.1■□□□□ 0.33
PRKCAP17252 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PRKCAP17252 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PRKCAP17252 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.1■□□□□ 0.33
PRKCAP17252 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.1■□□□□ 0.33
PRKCAP17252 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.1■□□□□ 0.33
PRKCAP17252 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRKCAP17252 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRKCAP17252 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PRKCAP17252 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PRKCAP17252 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.09■□□□□ 0.33
PRKCAP17252 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.09■□□□□ 0.33
PRKCAP17252 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.09■□□□□ 0.33
PRKCAP17252 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms