Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PDGFRAP16234 AC138932.1-201ENST00000534164 6830 ntBASIC19.39■□□□□ 0.7
PDGFRAP16234 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 MIR1224-201ENST00000408193 85 ntBASIC19.39■□□□□ 0.69
PDGFRAP16234 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.39■□□□□ 0.69
PDGFRAP16234 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFRAP16234 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.39■□□□□ 0.69
PDGFRAP16234 AC112497.1-201ENST00000624824 639 ntBASIC19.39■□□□□ 0.69
PDGFRAP16234 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFRAP16234 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
PDGFRAP16234 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFRAP16234 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.39■□□□□ 0.69
PDGFRAP16234 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.39■□□□□ 0.69
PDGFRAP16234 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFRAP16234 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDGFRAP16234 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFRAP16234 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.39■□□□□ 0.69
PDGFRAP16234 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDGFRAP16234 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFRAP16234 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
PDGFRAP16234 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 AC009947.2-201ENST00000444014 672 ntBASIC19.38■□□□□ 0.69
PDGFRAP16234 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFRAP16234 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFRAP16234 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFRAP16234 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFRAP16234 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.38■□□□□ 0.69
PDGFRAP16234 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.38■□□□□ 0.69
PDGFRAP16234 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PDGFRAP16234 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDGFRAP16234 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFRAP16234 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFRAP16234 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFRAP16234 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PDGFRAP16234 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDGFRAP16234 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.37■□□□□ 0.69
PDGFRAP16234 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.37■□□□□ 0.69
PDGFRAP16234 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFRAP16234 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFRAP16234 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFRAP16234 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.36■□□□□ 0.69
PDGFRAP16234 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFRAP16234 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PDGFRAP16234 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.36■□□□□ 0.69
PDGFRAP16234 AC010331.1-201ENST00000611423 582 ntBASIC19.36■□□□□ 0.69
PDGFRAP16234 AL138966.2-201ENST00000621997 464 ntBASIC19.36■□□□□ 0.69
PDGFRAP16234 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
PDGFRAP16234 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFRAP16234 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PDGFRAP16234 AC099343.3-201ENST00000605834 2503 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms