Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC32.26■■■□□ 2.76
TOP2AP11388 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC32.26■■■□□ 2.76
TOP2AP11388 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TOP2AP11388 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
TOP2AP11388 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
TOP2AP11388 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TOP2AP11388 AC093909.1-201ENST00000504731 1122 ntBASIC32.26■■■□□ 2.75
TOP2AP11388 AC092865.5-201ENST00000545435 363 ntBASIC32.26■■■□□ 2.75
TOP2AP11388 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 AL032819.2-201ENST00000624543 2162 ntBASIC32.25■■■□□ 2.75
TOP2AP11388 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC32.25■■■□□ 2.75
TOP2AP11388 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
TOP2AP11388 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC32.25■■■□□ 2.75
TOP2AP11388 AC021087.4-201ENST00000563761 564 ntBASIC32.25■■■□□ 2.75
TOP2AP11388 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 MTDHP3-201ENST00000594186 672 ntBASIC32.25■■■□□ 2.75
TOP2AP11388 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC32.25■■■□□ 2.75
TOP2AP11388 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC32.25■■■□□ 2.75
TOP2AP11388 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TOP2AP11388 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
TOP2AP11388 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
TOP2AP11388 SNAI3-AS1-205ENST00000568633 2096 ntBASIC32.24■■■□□ 2.75
TOP2AP11388 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TOP2AP11388 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC32.24■■■□□ 2.75
TOP2AP11388 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC32.24■■■□□ 2.75
TOP2AP11388 AC009533.2-201ENST00000543664 586 ntBASIC32.24■■■□□ 2.75
TOP2AP11388 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC32.24■■■□□ 2.75
TOP2AP11388 AC025062.2-201ENST00000605477 670 ntBASIC32.24■■■□□ 2.75
TOP2AP11388 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC32.24■■■□□ 2.75
TOP2AP11388 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC32.24■■■□□ 2.75
TOP2AP11388 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
TOP2AP11388 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TOP2AP11388 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC32.24■■■□□ 2.75
TOP2AP11388 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
TOP2AP11388 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
TOP2AP11388 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC32.24■■■□□ 2.75
TOP2AP11388 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
TOP2AP11388 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 RPL13AP23-201ENST00000480739 586 ntBASIC32.23■■■□□ 2.75
TOP2AP11388 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC32.23■■■□□ 2.75
TOP2AP11388 CD63-204ENST00000546939 779 ntTSL 3 BASIC32.23■■■□□ 2.75
TOP2AP11388 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC32.23■■■□□ 2.75
TOP2AP11388 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC32.23■■■□□ 2.75
TOP2AP11388 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC32.23■■■□□ 2.75
TOP2AP11388 AL161938.1-201ENST00000569833 2180 ntBASIC32.23■■■□□ 2.75
TOP2AP11388 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC32.23■■■□□ 2.75
TOP2AP11388 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TOP2AP11388 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC32.22■■■□□ 2.75
TOP2AP11388 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 AC012640.2-201ENST00000561606 901 ntBASIC32.22■■■□□ 2.75
TOP2AP11388 AC034105.1-201ENST00000563488 319 ntBASIC32.22■■■□□ 2.75
TOP2AP11388 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC32.22■■■□□ 2.75
TOP2AP11388 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
TOP2AP11388 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC32.22■■■□□ 2.75
TOP2AP11388 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC32.22■■■□□ 2.75
TOP2AP11388 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC32.22■■■□□ 2.75
TOP2AP11388 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC32.22■■■□□ 2.75
TOP2AP11388 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TOP2AP11388 BID-204ENST00000399767 2129 ntTSL 2 BASIC32.22■■■□□ 2.75
TOP2AP11388 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC32.21■■■□□ 2.75
TOP2AP11388 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC32.21■■■□□ 2.75
TOP2AP11388 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC32.21■■■□□ 2.75
TOP2AP11388 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC32.21■■■□□ 2.75
TOP2AP11388 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 AL139288.1-201ENST00000623748 933 ntBASIC32.21■■■□□ 2.75
TOP2AP11388 AC116407.3-201ENST00000623905 1129 ntBASIC32.21■■■□□ 2.75
TOP2AP11388 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC32.21■■■□□ 2.75
TOP2AP11388 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
TOP2AP11388 FABP5-202ENST00000396359 986 ntTSL 5 BASIC32.21■■■□□ 2.75
TOP2AP11388 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC32.21■■■□□ 2.75
TOP2AP11388 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC32.21■■■□□ 2.75
TOP2AP11388 CYGB-205ENST00000590175 830 ntTSL 3 BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms