Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CD28P10747 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.45□□□□□ -0.1
CD28P10747 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.45□□□□□ -0.1
CD28P10747 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CD28P10747 RNF126P1-202ENST00000569893 925 ntBASIC14.45□□□□□ -0.1
CD28P10747 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.45□□□□□ -0.1
CD28P10747 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.45□□□□□ -0.1
CD28P10747 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
CD28P10747 AC006333.2-201ENST00000607957 2099 ntBASIC14.45□□□□□ -0.1
CD28P10747 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.45□□□□□ -0.1
CD28P10747 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.44□□□□□ -0.1
CD28P10747 KRT18P1-202ENST00000452408 1331 ntBASIC14.44□□□□□ -0.1
CD28P10747 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CD28P10747 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.44□□□□□ -0.1
CD28P10747 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.44□□□□□ -0.1
CD28P10747 CHCHD2P8-201ENST00000429873 447 ntBASIC14.44□□□□□ -0.1
CD28P10747 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.44□□□□□ -0.1
CD28P10747 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.44□□□□□ -0.1
CD28P10747 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.44□□□□□ -0.1
CD28P10747 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CD28P10747 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.44□□□□□ -0.1
CD28P10747 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.44□□□□□ -0.1
CD28P10747 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.44□□□□□ -0.1
CD28P10747 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.44□□□□□ -0.1
CD28P10747 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
CD28P10747 AC034236.2-201ENST00000606662 1610 ntBASIC14.44□□□□□ -0.1
CD28P10747 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD28P10747 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CD28P10747 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.43□□□□□ -0.1
CD28P10747 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.43□□□□□ -0.1
CD28P10747 AC120498.9-201ENST00000339021 3867 ntBASIC14.43□□□□□ -0.1
CD28P10747 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CD28P10747 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD28P10747 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CD28P10747 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD28P10747 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CD28P10747 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.43□□□□□ -0.1
CD28P10747 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD28P10747 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.42□□□□□ -0.1
CD28P10747 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms