Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PF4V1P10720 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.66□□□□□ -0.06
PF4V1P10720 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.66□□□□□ -0.06
PF4V1P10720 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.66□□□□□ -0.06
PF4V1P10720 AC036111.1-201ENST00000533973 1582 ntBASIC14.66□□□□□ -0.06
PF4V1P10720 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PF4V1P10720 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.66□□□□□ -0.06
PF4V1P10720 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PF4V1P10720 PCED1CP-201ENST00000419887 785 ntBASIC14.66□□□□□ -0.06
PF4V1P10720 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.66□□□□□ -0.06
PF4V1P10720 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 AL441883.1-201ENST00000566170 1045 ntBASIC14.66□□□□□ -0.06
PF4V1P10720 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.66□□□□□ -0.06
PF4V1P10720 MIR4674-201ENST00000582457 87 ntBASIC14.66□□□□□ -0.06
PF4V1P10720 AC093458.2-201ENST00000623150 629 ntBASIC14.66□□□□□ -0.06
PF4V1P10720 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.66□□□□□ -0.06
PF4V1P10720 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.66□□□□□ -0.06
PF4V1P10720 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PF4V1P10720 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PF4V1P10720 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PF4V1P10720 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.65□□□□□ -0.06
PF4V1P10720 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PF4V1P10720 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PF4V1P10720 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PF4V1P10720 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PF4V1P10720 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.65□□□□□ -0.06
PF4V1P10720 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.65□□□□□ -0.06
PF4V1P10720 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.65□□□□□ -0.06
PF4V1P10720 MIR3180-5-201ENST00000583743 153 ntBASIC14.65□□□□□ -0.06
PF4V1P10720 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.65□□□□□ -0.06
PF4V1P10720 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.65□□□□□ -0.06
PF4V1P10720 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.65□□□□□ -0.06
PF4V1P10720 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PF4V1P10720 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PF4V1P10720 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.65□□□□□ -0.06
PF4V1P10720 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
PF4V1P10720 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 KRT8P32-201ENST00000512863 1461 ntBASIC14.64□□□□□ -0.07
PF4V1P10720 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PF4V1P10720 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.64□□□□□ -0.07
PF4V1P10720 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.64□□□□□ -0.07
PF4V1P10720 NEK4P2-201ENST00000580004 1012 ntBASIC14.64□□□□□ -0.07
PF4V1P10720 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.64□□□□□ -0.07
PF4V1P10720 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.64□□□□□ -0.07
PF4V1P10720 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.64□□□□□ -0.07
PF4V1P10720 CR769767.2-201ENST00000622735 460 ntBASIC14.64□□□□□ -0.07
PF4V1P10720 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PF4V1P10720 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PF4V1P10720 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.64□□□□□ -0.07
PF4V1P10720 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms