Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 KRT16P1-201ENST00000399124 1418 ntBASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-30-3P0DP02 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 MIR718-201ENST00000390190 70 ntBASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 RPS2P55-201ENST00000397318 883 ntBASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 KSR1P1-201ENST00000446298 240 ntBASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 AC107956.1-201ENST00000494359 873 ntBASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 AC008550.1-201ENST00000511500 884 ntBASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 AP001412.1-201ENST00000608405 714 ntBASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-30-3P0DP02 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 AC012313.1-201ENST00000593393 3059 ntBASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 CD177P1-201ENST00000606252 935 ntBASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-30-3P0DP02 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV3-30-3P0DP02 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms