Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 LINC01126-201ENST00000623515 1646 ntBASIC20.75■□□□□ 0.91
CYP3A4P08684 AC099343.3-201ENST00000605834 2503 ntBASIC20.74■□□□□ 0.91
CYP3A4P08684 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 AC087289.5-201ENST00000586076 3175 ntBASIC20.74■□□□□ 0.91
CYP3A4P08684 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP3A4P08684 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 UPK3BP1-201ENST00000428678 509 ntBASIC20.74■□□□□ 0.91
CYP3A4P08684 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP3A4P08684 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CYP3A4P08684 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP3A4P08684 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP3A4P08684 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.74■□□□□ 0.91
CYP3A4P08684 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CYP3A4P08684 AL390719.2-201ENST00000606993 987 ntBASIC20.74■□□□□ 0.91
CYP3A4P08684 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CYP3A4P08684 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP3A4P08684 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.73■□□□□ 0.91
CYP3A4P08684 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.73■□□□□ 0.91
CYP3A4P08684 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.73■□□□□ 0.91
CYP3A4P08684 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CYP3A4P08684 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.73■□□□□ 0.91
CYP3A4P08684 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.73■□□□□ 0.91
CYP3A4P08684 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.73■□□□□ 0.91
CYP3A4P08684 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 KRT8P26-201ENST00000534154 1276 ntBASIC20.73■□□□□ 0.91
CYP3A4P08684 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CYP3A4P08684 GPR32P1-201ENST00000601788 811 ntBASIC20.73■□□□□ 0.91
CYP3A4P08684 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.73■□□□□ 0.91
CYP3A4P08684 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.73■□□□□ 0.91
CYP3A4P08684 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP3A4P08684 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
CYP3A4P08684 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.73■□□□□ 0.91
CYP3A4P08684 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 AC016734.2-201ENST00000624325 1377 ntBASIC20.72■□□□□ 0.91
CYP3A4P08684 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CYP3A4P08684 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.72■□□□□ 0.91
CYP3A4P08684 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.72■□□□□ 0.91
CYP3A4P08684 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.72■□□□□ 0.91
CYP3A4P08684 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CYP3A4P08684 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.72■□□□□ 0.91
CYP3A4P08684 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.72■□□□□ 0.91
CYP3A4P08684 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
CYP3A4P08684 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
CYP3A4P08684 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CYP3A4P08684 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CYP3A4P08684 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CYP3A4P08684 Z83836.1-201ENST00000624605 1642 ntBASIC20.71■□□□□ 0.91
CYP3A4P08684 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms