Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM2P07951 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM2P07951 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM2P07951 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TPM2P07951 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.03■□□□□ 0.96
TPM2P07951 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.03■□□□□ 0.96
TPM2P07951 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.03■□□□□ 0.96
TPM2P07951 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM2P07951 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM2P07951 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
TPM2P07951 AL512353.2-201ENST00000448759 1962 ntBASIC21.03■□□□□ 0.96
TPM2P07951 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM2P07951 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TPM2P07951 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.02■□□□□ 0.96
TPM2P07951 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.02■□□□□ 0.96
TPM2P07951 PRKY-204ENST00000533551 1019 ntBASIC21.02■□□□□ 0.96
TPM2P07951 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.02■□□□□ 0.96
TPM2P07951 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TPM2P07951 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TPM2P07951 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TPM2P07951 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM2P07951 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM2P07951 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TPM2P07951 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TPM2P07951 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TPM2P07951 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM2P07951 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TPM2P07951 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM2P07951 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM2P07951 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.01■□□□□ 0.95
TPM2P07951 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 AC133041.1-202ENST00000642053 222 ntBASIC21.01■□□□□ 0.95
TPM2P07951 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TPM2P07951 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM2P07951 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 AC135776.1-201ENST00000319817 2481 ntBASIC21.01■□□□□ 0.95
TPM2P07951 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TPM2P07951 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TPM2P07951 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 FEM1AP3-201ENST00000403722 1741 ntBASIC21.01■□□□□ 0.95
TPM2P07951 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM2P07951 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TPM2P07951 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21■□□□□ 0.95
TPM2P07951 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TPM2P07951 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21■□□□□ 0.95
TPM2P07951 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TPM2P07951 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21■□□□□ 0.95
TPM2P07951 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21■□□□□ 0.95
TPM2P07951 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21■□□□□ 0.95
TPM2P07951 AC083880.1-201ENST00000608266 535 ntBASIC21■□□□□ 0.95
TPM2P07951 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TPM2P07951 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TPM2P07951 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms