Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.21■□□□□ 0.51
CAPN1P07384 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.21■□□□□ 0.51
CAPN1P07384 AC068587.9-201ENST00000641814 219 ntBASIC18.21■□□□□ 0.51
CAPN1P07384 MTMR9LP-203ENST00000426597 1545 ntBASIC18.21■□□□□ 0.51
CAPN1P07384 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.21■□□□□ 0.51
CAPN1P07384 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CAPN1P07384 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.21■□□□□ 0.51
CAPN1P07384 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.21■□□□□ 0.51
CAPN1P07384 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.21■□□□□ 0.51
CAPN1P07384 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
CAPN1P07384 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CAPN1P07384 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CAPN1P07384 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CAPN1P07384 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN1P07384 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN1P07384 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CAPN1P07384 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CAPN1P07384 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.2■□□□□ 0.5
CAPN1P07384 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.2■□□□□ 0.5
CAPN1P07384 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.2■□□□□ 0.5
CAPN1P07384 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CAPN1P07384 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CAPN1P07384 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN1P07384 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN1P07384 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CAPN1P07384 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN1P07384 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN1P07384 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CAPN1P07384 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.19■□□□□ 0.5
CAPN1P07384 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CAPN1P07384 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN1P07384 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 KRT8P3-201ENST00000519669 1449 ntBASIC18.19■□□□□ 0.5
CAPN1P07384 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CAPN1P07384 AL499627.1-201ENST00000569373 2188 ntBASIC18.19■□□□□ 0.5
CAPN1P07384 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.19■□□□□ 0.5
CAPN1P07384 AL590326.2-201ENST00000625139 305 ntBASIC18.19■□□□□ 0.5
CAPN1P07384 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 KRT8P32-201ENST00000512863 1461 ntBASIC18.19■□□□□ 0.5
CAPN1P07384 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN1P07384 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CAPN1P07384 AC073592.3-201ENST00000625118 1834 ntBASIC18.19■□□□□ 0.5
CAPN1P07384 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CAPN1P07384 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN1P07384 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN1P07384 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN1P07384 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.18■□□□□ 0.5
CAPN1P07384 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN1P07384 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CAPN1P07384 AC128688.1-201ENST00000487626 519 ntBASIC18.18■□□□□ 0.5
CAPN1P07384 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CAPN1P07384 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN1P07384 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN1P07384 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CAPN1P07384 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.18■□□□□ 0.5
CAPN1P07384 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms