Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.5□□□□□ -0.57
APOBP04114 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.5□□□□□ -0.57
APOBP04114 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.5□□□□□ -0.57
APOBP04114 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
APOBP04114 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.5□□□□□ -0.57
APOBP04114 AC004817.3-201ENST00000602957 2129 ntBASIC11.5□□□□□ -0.57
APOBP04114 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.5□□□□□ -0.57
APOBP04114 AC107918.4-202ENST00000641623 219 ntBASIC11.5□□□□□ -0.57
APOBP04114 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOBP04114 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOBP04114 Z98044.1-201ENST00000632503 1764 ntBASIC11.49□□□□□ -0.57
APOBP04114 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 NKAPP1-205ENST00000585790 367 ntBASIC11.49□□□□□ -0.57
APOBP04114 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.49□□□□□ -0.57
APOBP04114 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 FP475955.4-201ENST00000623131 1990 ntBASIC11.49□□□□□ -0.57
APOBP04114 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 AC027612.4-201ENST00000605371 583 ntBASIC11.49□□□□□ -0.57
APOBP04114 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.49□□□□□ -0.57
APOBP04114 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
APOBP04114 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
APOBP04114 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.49□□□□□ -0.57
APOBP04114 AC040169.1-201ENST00000565382 521 ntBASIC11.49□□□□□ -0.57
APOBP04114 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOBP04114 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.49□□□□□ -0.57
APOBP04114 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 AC073621.1-201ENST00000392730 636 ntBASIC11.48□□□□□ -0.57
APOBP04114 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 AC064836.3-201ENST00000607928 673 ntBASIC11.48□□□□□ -0.57
APOBP04114 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.48□□□□□ -0.57
APOBP04114 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.48□□□□□ -0.57
APOBP04114 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.48□□□□□ -0.57
APOBP04114 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.48□□□□□ -0.57
APOBP04114 AC002347.1-201ENST00000569543 541 ntBASIC11.48□□□□□ -0.57
APOBP04114 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.48□□□□□ -0.57
APOBP04114 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.48□□□□□ -0.57
APOBP04114 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.48□□□□□ -0.57
APOBP04114 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
APOBP04114 AL139400.1-201ENST00000366220 510 ntBASIC11.48□□□□□ -0.57
APOBP04114 LAGE3P1-201ENST00000425356 484 ntBASIC11.48□□□□□ -0.57
APOBP04114 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.48□□□□□ -0.57
APOBP04114 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.48□□□□□ -0.57
APOBP04114 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
APOBP04114 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
APOBP04114 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
APOBP04114 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.48□□□□□ -0.57
APOBP04114 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC11.48□□□□□ -0.57
APOBP04114 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOBP04114 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
APOBP04114 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
APOBP04114 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms