Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PDGFAP04085 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFAP04085 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PDGFAP04085 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PDGFAP04085 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFAP04085 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFAP04085 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFAP04085 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFAP04085 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFAP04085 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.27■□□□□ 0.35
PDGFAP04085 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
PDGFAP04085 AC093525.10-201ENST00000625130 1569 ntBASIC17.27■□□□□ 0.35
PDGFAP04085 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.27■□□□□ 0.35
PDGFAP04085 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDGFAP04085 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFAP04085 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDGFAP04085 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDGFAP04085 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDGFAP04085 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PDGFAP04085 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PDGFAP04085 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDGFAP04085 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 RNF126P1-202ENST00000569893 925 ntBASIC17.26■□□□□ 0.35
PDGFAP04085 MIR3180-5-201ENST00000583743 153 ntBASIC17.26■□□□□ 0.35
PDGFAP04085 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFAP04085 AL031008.1-201ENST00000619963 541 ntBASIC17.26■□□□□ 0.35
PDGFAP04085 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFAP04085 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFAP04085 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.26■□□□□ 0.35
PDGFAP04085 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PDGFAP04085 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PDGFAP04085 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 KRT18P1-202ENST00000452408 1331 ntBASIC17.25■□□□□ 0.35
PDGFAP04085 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.25■□□□□ 0.35
PDGFAP04085 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 TSPY19P-201ENST00000418461 509 ntBASIC17.25■□□□□ 0.35
PDGFAP04085 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 TSPY18P-201ENST00000441642 509 ntBASIC17.25■□□□□ 0.35
PDGFAP04085 MCCD1P1-208ENST00000445732 328 ntBASIC17.25■□□□□ 0.35
PDGFAP04085 TPSP2-201ENST00000561760 610 ntBASIC17.25■□□□□ 0.35
PDGFAP04085 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.25■□□□□ 0.35
PDGFAP04085 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.25■□□□□ 0.35
PDGFAP04085 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 AL136038.4-201ENST00000603606 1261 ntBASIC17.25■□□□□ 0.35
PDGFAP04085 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PDGFAP04085 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFAP04085 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFAP04085 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFAP04085 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.25■□□□□ 0.35
PDGFAP04085 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PDGFAP04085 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFAP04085 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 AL391807.1-203ENST00000604392 2365 ntBASIC17.24■□□□□ 0.35
PDGFAP04085 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PDGFAP04085 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFAP04085 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PDGFAP04085 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 MIR662-201ENST00000384847 95 ntBASIC17.24■□□□□ 0.35
PDGFAP04085 TSPY22P-201ENST00000427496 604 ntBASIC17.24■□□□□ 0.35
PDGFAP04085 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFAP04085 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFAP04085 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 AC104692.2-201ENST00000603054 253 ntBASIC17.24■□□□□ 0.35
PDGFAP04085 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.24■□□□□ 0.35
PDGFAP04085 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 AL049812.1-201ENST00000432563 2267 ntBASIC17.24■□□□□ 0.35
PDGFAP04085 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFAP04085 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
PDGFAP04085 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFAP04085 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDGFAP04085 AC138932.1-201ENST00000534164 6830 ntBASIC17.24■□□□□ 0.35
PDGFAP04085 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms