Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.73■□□□□ 0.91
GGPS1O95749 GPR32P1-201ENST00000601788 811 ntBASIC20.73■□□□□ 0.91
GGPS1O95749 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.73■□□□□ 0.91
GGPS1O95749 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.73■□□□□ 0.91
GGPS1O95749 AL691432.3-201ENST00000621860 400 ntBASIC20.73■□□□□ 0.91
GGPS1O95749 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.73■□□□□ 0.91
GGPS1O95749 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.73■□□□□ 0.91
GGPS1O95749 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GGPS1O95749 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.72■□□□□ 0.91
GGPS1O95749 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 IGHGP-201ENST00000390555 1178 ntBASIC20.72■□□□□ 0.91
GGPS1O95749 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 DRAXINP1-201ENST00000437611 948 ntBASIC20.72■□□□□ 0.91
GGPS1O95749 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.72■□□□□ 0.91
GGPS1O95749 LINC00265-3P-201ENST00000447588 903 ntBASIC20.72■□□□□ 0.91
GGPS1O95749 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.72■□□□□ 0.91
GGPS1O95749 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.72■□□□□ 0.91
GGPS1O95749 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.72■□□□□ 0.91
GGPS1O95749 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
GGPS1O95749 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.72■□□□□ 0.91
GGPS1O95749 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 AL163051.1-201ENST00000569214 1512 ntBASIC20.72■□□□□ 0.91
GGPS1O95749 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
GGPS1O95749 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.71■□□□□ 0.91
GGPS1O95749 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.71■□□□□ 0.91
GGPS1O95749 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.71■□□□□ 0.91
GGPS1O95749 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GGPS1O95749 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 AP000593.1-201ENST00000393668 712 ntBASIC20.71■□□□□ 0.91
GGPS1O95749 TPM4P1-201ENST00000436100 807 ntBASIC20.71■□□□□ 0.91
GGPS1O95749 AP000867.3-201ENST00000524675 377 ntBASIC20.71■□□□□ 0.91
GGPS1O95749 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.71■□□□□ 0.91
GGPS1O95749 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.71■□□□□ 0.91
GGPS1O95749 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.71■□□□□ 0.91
GGPS1O95749 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GGPS1O95749 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
GGPS1O95749 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.7■□□□□ 0.9
GGPS1O95749 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
GGPS1O95749 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.7■□□□□ 0.9
GGPS1O95749 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.7■□□□□ 0.9
GGPS1O95749 TOB2P1-201ENST00000469761 992 ntBASIC20.7■□□□□ 0.9
GGPS1O95749 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.7■□□□□ 0.9
GGPS1O95749 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
GGPS1O95749 AC090616.6-201ENST00000582640 721 ntBASIC20.7■□□□□ 0.9
GGPS1O95749 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.7■□□□□ 0.9
GGPS1O95749 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.7■□□□□ 0.9
GGPS1O95749 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GGPS1O95749 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
GGPS1O95749 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GGPS1O95749 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
GGPS1O95749 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 IGHV3-41-201ENST00000613121 348 ntBASIC20.69■□□□□ 0.9
GGPS1O95749 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
GGPS1O95749 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.69■□□□□ 0.9
GGPS1O95749 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms