Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 AC090164.3-201ENST00000610780 2143 ntBASIC18.39■□□□□ 0.53
PRAMEF1O95521 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF1O95521 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF1O95521 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 GCSHP2-201ENST00000560971 527 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 RN7SL850P-201ENST00000579959 291 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 AC140113.3-201ENST00000605663 199 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 AC010240.3-201ENST00000607688 395 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 AC139887.4-201ENST00000607877 719 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 AL031432.5-201ENST00000641059 760 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 AL163051.1-201ENST00000569214 1512 ntBASIC18.38■□□□□ 0.53
PRAMEF1O95521 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF1O95521 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF1O95521 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 AC117947.1-201ENST00000427448 529 ntBASIC18.37■□□□□ 0.53
PRAMEF1O95521 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 YBX1P2-201ENST00000489612 999 ntBASIC18.37■□□□□ 0.53
PRAMEF1O95521 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 AC006011.2-201ENST00000621313 1158 ntBASIC18.37■□□□□ 0.53
PRAMEF1O95521 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF1O95521 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF1O95521 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms