Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDH8O95206 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH8O95206 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDH8O95206 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 TSPY22P-201ENST00000427496 604 ntBASIC18.45■□□□□ 0.54
PCDH8O95206 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH8O95206 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH8O95206 KRT8P26-201ENST00000534154 1276 ntBASIC18.45■□□□□ 0.54
PCDH8O95206 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH8O95206 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH8O95206 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH8O95206 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH8O95206 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH8O95206 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH8O95206 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH8O95206 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH8O95206 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH8O95206 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH8O95206 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDH8O95206 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDH8O95206 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH8O95206 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 AP000593.1-201ENST00000393668 712 ntBASIC18.44■□□□□ 0.54
PCDH8O95206 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 AP003733.1-201ENST00000491725 852 ntBASIC18.44■□□□□ 0.54
PCDH8O95206 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.44■□□□□ 0.54
PCDH8O95206 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH8O95206 RNF126P1-202ENST00000569893 925 ntBASIC18.44■□□□□ 0.54
PCDH8O95206 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDH8O95206 AC092329.2-201ENST00000598402 547 ntBASIC18.44■□□□□ 0.54
PCDH8O95206 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH8O95206 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH8O95206 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH8O95206 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH8O95206 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDH8O95206 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH8O95206 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDH8O95206 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH8O95206 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH8O95206 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH8O95206 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH8O95206 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH8O95206 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH8O95206 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDH8O95206 NPAP1P7-201ENST00000613027 823 ntBASIC18.43■□□□□ 0.54
PCDH8O95206 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH8O95206 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDH8O95206 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH8O95206 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH8O95206 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 Z83836.1-201ENST00000624605 1642 ntBASIC18.42■□□□□ 0.54
PCDH8O95206 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
PCDH8O95206 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH8O95206 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
PCDH8O95206 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDH8O95206 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH8O95206 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH8O95206 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
PCDH8O95206 CLEC4GP1-201ENST00000596555 870 ntBASIC18.42■□□□□ 0.54
PCDH8O95206 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH8O95206 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms