Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GPC4O75487 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.54■□□□□ 0.56
GPC4O75487 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC4O75487 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC4O75487 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
GPC4O75487 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
GPC4O75487 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC4O75487 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.54■□□□□ 0.56
GPC4O75487 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.54■□□□□ 0.56
GPC4O75487 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC4O75487 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GPC4O75487 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GPC4O75487 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.53■□□□□ 0.56
GPC4O75487 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.53■□□□□ 0.56
GPC4O75487 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
GPC4O75487 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.53■□□□□ 0.56
GPC4O75487 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC4O75487 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC4O75487 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GPC4O75487 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
GPC4O75487 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GPC4O75487 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.52■□□□□ 0.56
GPC4O75487 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GPC4O75487 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
GPC4O75487 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
GPC4O75487 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GPC4O75487 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.52■□□□□ 0.56
GPC4O75487 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.52■□□□□ 0.56
GPC4O75487 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.56
GPC4O75487 AL023803.3-201ENST00000615559 522 ntBASIC18.52■□□□□ 0.56
GPC4O75487 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.52■□□□□ 0.56
GPC4O75487 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.52■□□□□ 0.56
GPC4O75487 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GPC4O75487 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.52■□□□□ 0.55
GPC4O75487 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
GPC4O75487 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.52■□□□□ 0.55
GPC4O75487 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
GPC4O75487 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
GPC4O75487 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GPC4O75487 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.51■□□□□ 0.55
GPC4O75487 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
GPC4O75487 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.51■□□□□ 0.55
GPC4O75487 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
GPC4O75487 KRT8P9-201ENST00000558927 1449 ntBASIC18.51■□□□□ 0.55
GPC4O75487 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.51■□□□□ 0.55
GPC4O75487 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GPC4O75487 MMP23A-201ENST00000234610 1017 ntBASIC18.51■□□□□ 0.55
GPC4O75487 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
GPC4O75487 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.51■□□□□ 0.55
GPC4O75487 BX088651.1-201ENST00000540551 451 ntBASIC18.51■□□□□ 0.55
GPC4O75487 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.51■□□□□ 0.55
GPC4O75487 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms