Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH4O75427 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 LINC01568-207ENST00000641790 1380 ntBASIC19.23■□□□□ 0.67
LRCH4O75427 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.23■□□□□ 0.67
LRCH4O75427 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 HMGA1P5-201ENST00000412453 271 ntBASIC19.23■□□□□ 0.67
LRCH4O75427 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.23■□□□□ 0.67
LRCH4O75427 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH4O75427 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
LRCH4O75427 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH4O75427 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH4O75427 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LRCH4O75427 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRCH4O75427 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH4O75427 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 AC009102.3-201ENST00000623118 1491 ntBASIC19.22■□□□□ 0.67
LRCH4O75427 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH4O75427 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
LRCH4O75427 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRCH4O75427 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 MIR149-201ENST00000384879 89 ntBASIC19.22■□□□□ 0.67
LRCH4O75427 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 AC087499.1-201ENST00000418141 1075 ntBASIC19.22■□□□□ 0.67
LRCH4O75427 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.22■□□□□ 0.67
LRCH4O75427 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.22■□□□□ 0.67
LRCH4O75427 AC104390.1-201ENST00000555663 520 ntBASIC19.22■□□□□ 0.67
LRCH4O75427 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
LRCH4O75427 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.22■□□□□ 0.67
LRCH4O75427 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH4O75427 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.22■□□□□ 0.67
LRCH4O75427 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH4O75427 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH4O75427 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH4O75427 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 AC009947.2-201ENST00000444014 672 ntBASIC19.21■□□□□ 0.67
LRCH4O75427 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.21■□□□□ 0.67
LRCH4O75427 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.21■□□□□ 0.67
LRCH4O75427 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.21■□□□□ 0.67
LRCH4O75427 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH4O75427 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
LRCH4O75427 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH4O75427 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
LRCH4O75427 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms