Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD1O75127 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.69■■□□□ 1.38
PTCD1O75127 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.69■■□□□ 1.38
PTCD1O75127 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCD1O75127 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.69■■□□□ 1.38
PTCD1O75127 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.69■■□□□ 1.38
PTCD1O75127 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PTCD1O75127 BNIP3P18-201ENST00000593976 575 ntBASIC23.69■■□□□ 1.38
PTCD1O75127 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PTCD1O75127 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCD1O75127 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD1O75127 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCD1O75127 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PTCD1O75127 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.68■■□□□ 1.38
PTCD1O75127 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD1O75127 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD1O75127 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD1O75127 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.68■■□□□ 1.38
PTCD1O75127 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.68■■□□□ 1.38
PTCD1O75127 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.68■■□□□ 1.38
PTCD1O75127 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PTCD1O75127 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.68■■□□□ 1.38
PTCD1O75127 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.68■■□□□ 1.38
PTCD1O75127 BX640515.1-201ENST00000617215 977 ntBASIC23.68■■□□□ 1.38
PTCD1O75127 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.68■■□□□ 1.38
PTCD1O75127 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD1O75127 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.68■■□□□ 1.38
PTCD1O75127 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.68■■□□□ 1.38
PTCD1O75127 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PTCD1O75127 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD1O75127 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCD1O75127 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCD1O75127 RNA5SP419-201ENST00000515908 135 ntBASIC23.67■■□□□ 1.38
PTCD1O75127 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCD1O75127 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
PTCD1O75127 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD1O75127 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PTCD1O75127 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
PTCD1O75127 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PTCD1O75127 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PTCD1O75127 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCD1O75127 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCD1O75127 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.66■■□□□ 1.38
PTCD1O75127 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD1O75127 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.66■■□□□ 1.38
PTCD1O75127 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.66■■□□□ 1.38
PTCD1O75127 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCD1O75127 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD1O75127 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD1O75127 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PTCD1O75127 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.66■■□□□ 1.38
PTCD1O75127 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.65■■□□□ 1.38
PTCD1O75127 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 FAM197Y8-203ENST00000450145 560 ntBASIC23.65■■□□□ 1.38
PTCD1O75127 MIR5100-201ENST00000579544 119 ntBASIC23.65■■□□□ 1.38
PTCD1O75127 AL591684.3-201ENST00000605187 298 ntBASIC23.65■■□□□ 1.38
PTCD1O75127 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 AF228730.7-201ENST00000641842 219 ntBASIC23.65■■□□□ 1.38
PTCD1O75127 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.65■■□□□ 1.38
PTCD1O75127 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PTCD1O75127 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD1O75127 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD1O75127 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.64■■□□□ 1.38
PTCD1O75127 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD1O75127 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.64■■□□□ 1.38
PTCD1O75127 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.64■■□□□ 1.38
PTCD1O75127 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD1O75127 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD1O75127 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD1O75127 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD1O75127 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
PTCD1O75127 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.64■■□□□ 1.37
PTCD1O75127 POM121L3P-201ENST00000419331 1163 ntBASIC23.64■■□□□ 1.37
PTCD1O75127 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms