Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TSPAN3O60637 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.04■□□□□ 0.64
TSPAN3O60637 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.04■□□□□ 0.64
TSPAN3O60637 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.04■□□□□ 0.64
TSPAN3O60637 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TSPAN3O60637 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TSPAN3O60637 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.04■□□□□ 0.64
TSPAN3O60637 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN3O60637 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.03■□□□□ 0.64
TSPAN3O60637 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.03■□□□□ 0.64
TSPAN3O60637 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.03■□□□□ 0.64
TSPAN3O60637 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TSPAN3O60637 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN3O60637 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN3O60637 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TSPAN3O60637 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
TSPAN3O60637 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.02■□□□□ 0.64
TSPAN3O60637 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.02■□□□□ 0.64
TSPAN3O60637 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.02■□□□□ 0.64
TSPAN3O60637 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN3O60637 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TSPAN3O60637 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TSPAN3O60637 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.02■□□□□ 0.63
TSPAN3O60637 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.02■□□□□ 0.63
TSPAN3O60637 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.02■□□□□ 0.63
TSPAN3O60637 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TSPAN3O60637 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TSPAN3O60637 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TSPAN3O60637 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TSPAN3O60637 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.02■□□□□ 0.63
TSPAN3O60637 AL162741.1-201ENST00000565563 1558 ntBASIC19.02■□□□□ 0.63
TSPAN3O60637 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.02■□□□□ 0.63
TSPAN3O60637 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TSPAN3O60637 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
TSPAN3O60637 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.01■□□□□ 0.63
TSPAN3O60637 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.01■□□□□ 0.63
TSPAN3O60637 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.01■□□□□ 0.63
TSPAN3O60637 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.01■□□□□ 0.63
TSPAN3O60637 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
TSPAN3O60637 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TSPAN3O60637 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN3O60637 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19■□□□□ 0.63
TSPAN3O60637 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19■□□□□ 0.63
TSPAN3O60637 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TSPAN3O60637 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TSPAN3O60637 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19■□□□□ 0.63
TSPAN3O60637 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19■□□□□ 0.63
TSPAN3O60637 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 PVRIG2P-201ENST00000435460 978 ntBASIC19■□□□□ 0.63
TSPAN3O60637 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19■□□□□ 0.63
TSPAN3O60637 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19■□□□□ 0.63
TSPAN3O60637 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19■□□□□ 0.63
TSPAN3O60637 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms