Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.09■□□□□ 0.01
SSSCA1O60232 AL160286.2-201ENST00000567150 934 ntBASIC15.09■□□□□ 0.01
SSSCA1O60232 AC133552.2-202ENST00000575694 574 ntBASIC15.09■□□□□ 0.01
SSSCA1O60232 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.09■□□□□ 0.01
SSSCA1O60232 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.09■□□□□ 0.01
SSSCA1O60232 AC112777.1-201ENST00000540175 1423 ntBASIC15.09■□□□□ 0.01
SSSCA1O60232 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SSSCA1O60232 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SSSCA1O60232 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SSSCA1O60232 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SSSCA1O60232 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SSSCA1O60232 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SSSCA1O60232 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.08■□□□□ 0
SSSCA1O60232 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.08■□□□□ 0
SSSCA1O60232 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
SSSCA1O60232 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 AC087623.3-201ENST00000607047 1098 ntBASIC15.08■□□□□ 0
SSSCA1O60232 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.08■□□□□ 0
SSSCA1O60232 AC068587.9-201ENST00000641814 219 ntBASIC15.08■□□□□ 0
SSSCA1O60232 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.08■□□□□ 0
SSSCA1O60232 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SSSCA1O60232 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.08■□□□□ 0
SSSCA1O60232 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSSCA1O60232 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SSSCA1O60232 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SSSCA1O60232 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.07■□□□□ 0
SSSCA1O60232 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.07■□□□□ 0
SSSCA1O60232 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SSSCA1O60232 AC105036.2-201ENST00000569468 176 ntBASIC15.07■□□□□ 0
SSSCA1O60232 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.07■□□□□ 0
SSSCA1O60232 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.07■□□□□ 0
SSSCA1O60232 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SSSCA1O60232 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.07■□□□□ 0
SSSCA1O60232 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SSSCA1O60232 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSSCA1O60232 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms