Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 AC008687.5-201ENST00000593746 558 ntBASIC18.11■□□□□ 0.49
VEGFDO43915 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.11■□□□□ 0.49
VEGFDO43915 AC091076.1-201ENST00000610741 619 ntBASIC18.11■□□□□ 0.49
VEGFDO43915 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.11■□□□□ 0.49
VEGFDO43915 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.11■□□□□ 0.49
VEGFDO43915 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
VEGFDO43915 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.11■□□□□ 0.49
VEGFDO43915 AC093503.3-201ENST00000624917 2352 ntBASIC18.11■□□□□ 0.49
VEGFDO43915 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VEGFDO43915 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.1■□□□□ 0.49
VEGFDO43915 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.1■□□□□ 0.49
VEGFDO43915 AC073592.3-201ENST00000625118 1834 ntBASIC18.1■□□□□ 0.49
VEGFDO43915 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.1■□□□□ 0.49
VEGFDO43915 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VEGFDO43915 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VEGFDO43915 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VEGFDO43915 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VEGFDO43915 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VEGFDO43915 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.09■□□□□ 0.49
VEGFDO43915 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.09■□□□□ 0.49
VEGFDO43915 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.09■□□□□ 0.49
VEGFDO43915 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.09■□□□□ 0.49
VEGFDO43915 AC005332.1-201ENST00000577698 1310 ntBASIC18.09■□□□□ 0.49
VEGFDO43915 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 AL645929.1-201ENST00000420084 975 ntBASIC18.09■□□□□ 0.49
VEGFDO43915 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.09■□□□□ 0.49
VEGFDO43915 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.09■□□□□ 0.49
VEGFDO43915 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.09■□□□□ 0.49
VEGFDO43915 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VEGFDO43915 AC024563.2-201ENST00000603282 481 ntBASIC18.09■□□□□ 0.49
VEGFDO43915 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VEGFDO43915 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 AP000550.4-202ENST00000639755 178 ntBASIC18.09■□□□□ 0.49
VEGFDO43915 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 AL138781.2-201ENST00000617896 1843 ntBASIC18.09■□□□□ 0.49
VEGFDO43915 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.09■□□□□ 0.49
VEGFDO43915 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VEGFDO43915 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.09■□□□□ 0.49
VEGFDO43915 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.08■□□□□ 0.49
VEGFDO43915 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
VEGFDO43915 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VEGFDO43915 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
VEGFDO43915 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
VEGFDO43915 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.08■□□□□ 0.49
VEGFDO43915 KRT89P-201ENST00000620027 1478 ntBASIC18.08■□□□□ 0.49
VEGFDO43915 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.08■□□□□ 0.49
VEGFDO43915 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
VEGFDO43915 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.08■□□□□ 0.49
VEGFDO43915 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.08■□□□□ 0.49
VEGFDO43915 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 PCED1CP-201ENST00000419887 785 ntBASIC18.08■□□□□ 0.48
VEGFDO43915 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.08■□□□□ 0.48
VEGFDO43915 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.08■□□□□ 0.48
VEGFDO43915 AL358472.4-201ENST00000633140 710 ntBASIC18.08■□□□□ 0.48
VEGFDO43915 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VEGFDO43915 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.08■□□□□ 0.48
VEGFDO43915 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VEGFDO43915 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.08■□□□□ 0.48
VEGFDO43915 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VEGFDO43915 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.07■□□□□ 0.48
VEGFDO43915 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VEGFDO43915 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.07■□□□□ 0.48
VEGFDO43915 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VEGFDO43915 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms