Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ACTN4O43707 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.74■□□□□ 0.91
ACTN4O43707 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.74■□□□□ 0.91
ACTN4O43707 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ACTN4O43707 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ACTN4O43707 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.74■□□□□ 0.91
ACTN4O43707 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ACTN4O43707 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.74■□□□□ 0.91
ACTN4O43707 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.73■□□□□ 0.91
ACTN4O43707 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 UNC93B2-201ENST00000285383 730 ntBASIC20.73■□□□□ 0.91
ACTN4O43707 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
ACTN4O43707 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.73■□□□□ 0.91
ACTN4O43707 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.73■□□□□ 0.91
ACTN4O43707 AL353719.1-201ENST00000566847 864 ntBASIC20.73■□□□□ 0.91
ACTN4O43707 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.73■□□□□ 0.91
ACTN4O43707 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.73■□□□□ 0.91
ACTN4O43707 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.73■□□□□ 0.91
ACTN4O43707 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.73■□□□□ 0.91
ACTN4O43707 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.73■□□□□ 0.91
ACTN4O43707 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ACTN4O43707 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACTN4O43707 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.73■□□□□ 0.91
ACTN4O43707 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
ACTN4O43707 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ACTN4O43707 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 AC092338.2-201ENST00000568827 1415 ntBASIC20.72■□□□□ 0.91
ACTN4O43707 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.72■□□□□ 0.91
ACTN4O43707 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ACTN4O43707 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 SLC25A1P2-201ENST00000430693 912 ntBASIC20.72■□□□□ 0.91
ACTN4O43707 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.72■□□□□ 0.91
ACTN4O43707 FITM1-202ENST00000559294 800 ntBASIC20.72■□□□□ 0.91
ACTN4O43707 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ACTN4O43707 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.72■□□□□ 0.91
ACTN4O43707 PCDHB18P-201ENST00000524813 2368 ntBASIC20.72■□□□□ 0.91
ACTN4O43707 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ACTN4O43707 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTN4O43707 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ACTN4O43707 SDHAP2-201ENST00000455183 2001 ntBASIC20.71■□□□□ 0.91
ACTN4O43707 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
ACTN4O43707 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 REXO1L9P-201ENST00000604264 2108 ntBASIC20.71■□□□□ 0.91
ACTN4O43707 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.71■□□□□ 0.91
ACTN4O43707 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ACTN4O43707 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.71■□□□□ 0.91
ACTN4O43707 MIR4785-201ENST00000585005 73 ntBASIC20.71■□□□□ 0.91
ACTN4O43707 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 CR769767.2-201ENST00000622735 460 ntBASIC20.71■□□□□ 0.91
ACTN4O43707 TMEM191A-211ENST00000637163 1067 ntBASIC20.71■□□□□ 0.91
ACTN4O43707 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTN4O43707 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACTN4O43707 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.7■□□□□ 0.91
ACTN4O43707 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms