Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS4O43181 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS4O43181 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS4O43181 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
NDUFS4O43181 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS4O43181 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS4O43181 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS4O43181 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS4O43181 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS4O43181 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
NDUFS4O43181 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFS4O43181 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
NDUFS4O43181 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFS4O43181 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 MYLKP1-201ENST00000509077 1580 ntBASIC17.7■□□□□ 0.42
NDUFS4O43181 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS4O43181 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.7■□□□□ 0.42
NDUFS4O43181 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.7■□□□□ 0.42
NDUFS4O43181 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.7■□□□□ 0.42
NDUFS4O43181 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.7■□□□□ 0.42
NDUFS4O43181 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS4O43181 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.7■□□□□ 0.42
NDUFS4O43181 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NDUFS4O43181 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.7■□□□□ 0.42
NDUFS4O43181 KRT18P21-201ENST00000515767 1272 ntBASIC17.7■□□□□ 0.42
NDUFS4O43181 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.7■□□□□ 0.42
NDUFS4O43181 RN7SL850P-201ENST00000579959 291 ntBASIC17.7■□□□□ 0.42
NDUFS4O43181 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.7■□□□□ 0.42
NDUFS4O43181 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS4O43181 KRT8P50-201ENST00000562022 1438 ntBASIC17.7■□□□□ 0.42
NDUFS4O43181 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS4O43181 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NDUFS4O43181 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS4O43181 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS4O43181 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS4O43181 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NDUFS4O43181 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.69■□□□□ 0.42
NDUFS4O43181 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 AC140113.3-201ENST00000605663 199 ntBASIC17.69■□□□□ 0.42
NDUFS4O43181 AC139887.4-201ENST00000607877 719 ntBASIC17.69■□□□□ 0.42
NDUFS4O43181 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
NDUFS4O43181 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
NDUFS4O43181 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.69■□□□□ 0.42
NDUFS4O43181 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
NDUFS4O43181 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NDUFS4O43181 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS4O43181 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NDUFS4O43181 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms