Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CA15P1-201ENST00000481698 905 ntBASIC17.82■□□□□ 0.44
SLC28A1O00337 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC28A1O00337 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.82■□□□□ 0.44
SLC28A1O00337 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC28A1O00337 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A1O00337 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SLC28A1O00337 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A1O00337 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.82■□□□□ 0.44
SLC28A1O00337 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A1O00337 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC28A1O00337 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC28A1O00337 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A1O00337 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 GPAT2P1-201ENST00000444924 1672 ntBASIC17.81■□□□□ 0.44
SLC28A1O00337 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SLC28A1O00337 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC28A1O00337 AC097488.1-201ENST00000507834 756 ntBASIC17.81■□□□□ 0.44
SLC28A1O00337 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC28A1O00337 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC28A1O00337 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC28A1O00337 AP001412.1-201ENST00000608405 714 ntBASIC17.81■□□□□ 0.44
SLC28A1O00337 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC28A1O00337 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SLC28A1O00337 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC28A1O00337 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC28A1O00337 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A1O00337 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC28A1O00337 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A1O00337 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SLC28A1O00337 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 AC008764.6-201ENST00000595909 2069 ntBASIC17.8■□□□□ 0.44
SLC28A1O00337 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A1O00337 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A1O00337 AC142381.4-202ENST00000563973 229 ntBASIC17.8■□□□□ 0.44
SLC28A1O00337 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC28A1O00337 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC28A1O00337 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC28A1O00337 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC28A1O00337 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC28A1O00337 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC28A1O00337 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC28A1O00337 ESPNP-201ENST00000270691 2015 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC28A1O00337 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC28A1O00337 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SLC28A1O00337 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 RPS2P55-201ENST00000397318 883 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 SLC25A6P5-201ENST00000435663 894 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 UBE2SP1-201ENST00000450587 669 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 TSPY20P-201ENST00000450910 630 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 AC107956.1-201ENST00000494359 873 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC28A1O00337 OR6D1P-202ENST00000641007 5290 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 AC005332.8-201ENST00000622750 2735 ntBASIC17.79■□□□□ 0.44
SLC28A1O00337 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms