Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3B1O00203 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
AP3B1O00203 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
AP3B1O00203 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.68■□□□□ 0.58
AP3B1O00203 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.68■□□□□ 0.58
AP3B1O00203 FITM1-202ENST00000559294 800 ntBASIC18.68■□□□□ 0.58
AP3B1O00203 C2orf69P3-201ENST00000565542 1120 ntBASIC18.68■□□□□ 0.58
AP3B1O00203 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
AP3B1O00203 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.68■□□□□ 0.58
AP3B1O00203 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
AP3B1O00203 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.68■□□□□ 0.58
AP3B1O00203 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3B1O00203 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP3B1O00203 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3B1O00203 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
AP3B1O00203 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP3B1O00203 AC036111.1-201ENST00000533973 1582 ntBASIC18.68■□□□□ 0.58
AP3B1O00203 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.67■□□□□ 0.58
AP3B1O00203 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 AC093677.2-201ENST00000600169 1863 ntBASIC18.67■□□□□ 0.58
AP3B1O00203 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
AP3B1O00203 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 SLC25A6P5-201ENST00000435663 894 ntBASIC18.67■□□□□ 0.58
AP3B1O00203 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.67■□□□□ 0.58
AP3B1O00203 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3B1O00203 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.67■□□□□ 0.58
AP3B1O00203 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3B1O00203 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.67■□□□□ 0.58
AP3B1O00203 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
AP3B1O00203 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3B1O00203 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.66■□□□□ 0.58
AP3B1O00203 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 MIR149-201ENST00000384879 89 ntBASIC18.66■□□□□ 0.58
AP3B1O00203 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
AP3B1O00203 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.66■□□□□ 0.58
AP3B1O00203 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 AP003041.3-201ENST00000527151 707 ntBASIC18.66■□□□□ 0.58
AP3B1O00203 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 MIR3180-4-201ENST00000582223 153 ntBASIC18.66■□□□□ 0.58
AP3B1O00203 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.66■□□□□ 0.58
AP3B1O00203 AC010653.2-201ENST00000623505 997 ntBASIC18.66■□□□□ 0.58
AP3B1O00203 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.66■□□□□ 0.58
AP3B1O00203 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AP3B1O00203 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3B1O00203 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 AC092338.2-201ENST00000568827 1415 ntBASIC18.66■□□□□ 0.58
AP3B1O00203 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
AP3B1O00203 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3B1O00203 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
AP3B1O00203 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
AP3B1O00203 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms