Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 DBET-201ENST00000630918 3363 ntBASIC14.21□□□□□ -0.13
COLCA2A8K830 PAUPAR-201ENST00000630360 2965 ntBASIC14.21□□□□□ -0.13
COLCA2A8K830 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COLCA2A8K830 AC008556.1-201ENST00000610908 2040 ntBASIC14.21□□□□□ -0.13
COLCA2A8K830 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.21□□□□□ -0.13
COLCA2A8K830 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.21□□□□□ -0.13
COLCA2A8K830 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
COLCA2A8K830 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
COLCA2A8K830 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.21□□□□□ -0.13
COLCA2A8K830 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
COLCA2A8K830 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.21□□□□□ -0.13
COLCA2A8K830 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COLCA2A8K830 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COLCA2A8K830 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.21□□□□□ -0.13
COLCA2A8K830 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.21□□□□□ -0.13
COLCA2A8K830 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
COLCA2A8K830 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
COLCA2A8K830 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
COLCA2A8K830 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
COLCA2A8K830 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.2□□□□□ -0.14
COLCA2A8K830 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
COLCA2A8K830 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.2□□□□□ -0.14
COLCA2A8K830 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.2□□□□□ -0.14
COLCA2A8K830 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.2□□□□□ -0.14
COLCA2A8K830 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
COLCA2A8K830 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
COLCA2A8K830 YBX1P1-201ENST00000445822 960 ntBASIC14.2□□□□□ -0.14
COLCA2A8K830 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.2□□□□□ -0.14
COLCA2A8K830 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.2□□□□□ -0.14
COLCA2A8K830 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
COLCA2A8K830 AL356652.1-201ENST00000615962 565 ntBASIC14.2□□□□□ -0.14
COLCA2A8K830 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 AL138688.1-201ENST00000624851 1594 ntBASIC14.2□□□□□ -0.14
COLCA2A8K830 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
COLCA2A8K830 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.2□□□□□ -0.14
COLCA2A8K830 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COLCA2A8K830 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
COLCA2A8K830 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COLCA2A8K830 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COLCA2A8K830 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.19□□□□□ -0.14
COLCA2A8K830 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
COLCA2A8K830 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
COLCA2A8K830 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
COLCA2A8K830 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.19□□□□□ -0.14
COLCA2A8K830 AL513523.2-202ENST00000427283 2040 ntBASIC14.19□□□□□ -0.14
COLCA2A8K830 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.19□□□□□ -0.14
COLCA2A8K830 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
COLCA2A8K830 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.19□□□□□ -0.14
COLCA2A8K830 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.19□□□□□ -0.14
COLCA2A8K830 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.19□□□□□ -0.14
COLCA2A8K830 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COLCA2A8K830 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.19□□□□□ -0.14
COLCA2A8K830 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COLCA2A8K830 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
COLCA2A8K830 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.19□□□□□ -0.14
COLCA2A8K830 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms