Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 TSPY20P-201ENST00000450910 630 ntBASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPSF4LA6NMK7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 AC135776.1-201ENST00000319817 2481 ntBASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 AC008556.1-201ENST00000610908 2040 ntBASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.08■□□□□ 0.33
CPSF4LA6NMK7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 MESTP1-201ENST00000404287 994 ntBASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 ITM2C-210ENST00000620962 501 ntBASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.08■□□□□ 0.32
CPSF4LA6NMK7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 AC068880.1-201ENST00000507289 2297 ntBASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 CD177P1-201ENST00000606252 935 ntBASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 AP000692.2-201ENST00000608391 879 ntBASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.07■□□□□ 0.32
CPSF4LA6NMK7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms