Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 PRORSD1P-201ENST00000295112 541 ntBASIC19.94■□□□□ 0.78
LRRC53A6NM62 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 NUDT16P1-203ENST00000513809 620 ntBASIC19.94■□□□□ 0.78
LRRC53A6NM62 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC53A6NM62 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC53A6NM62 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC53A6NM62 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 KRT8P50-201ENST00000562022 1438 ntBASIC19.93■□□□□ 0.78
LRRC53A6NM62 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC53A6NM62 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 AC034236.2-201ENST00000606662 1610 ntBASIC19.92■□□□□ 0.78
LRRC53A6NM62 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 AP000593.1-201ENST00000393668 712 ntBASIC19.92■□□□□ 0.78
LRRC53A6NM62 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 AC098590.1-201ENST00000468126 897 ntBASIC19.92■□□□□ 0.78
LRRC53A6NM62 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC53A6NM62 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC53A6NM62 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC53A6NM62 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC53A6NM62 AC097488.1-201ENST00000507834 756 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms