Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 GUSBP6-202ENST00000438529 1198 ntBASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PRKY-204ENST00000533551 1019 ntBASIC15.8■□□□□ 0.12
TMEM235A6NFC5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PRORSD1P-202ENST00000563365 2154 ntBASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 AC008556.1-201ENST00000610908 2040 ntBASIC15.8■□□□□ 0.12
TMEM235A6NFC5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 NBPF21P-201ENST00000425093 1451 ntBASIC15.79■□□□□ 0.12
TMEM235A6NFC5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 AC083880.1-201ENST00000608266 535 ntBASIC15.79■□□□□ 0.12
TMEM235A6NFC5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TMEM235A6NFC5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 POU5F1P3-201ENST00000428824 1078 ntBASIC15.78■□□□□ 0.12
TMEM235A6NFC5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.78■□□□□ 0.12
TMEM235A6NFC5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms