Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PLEKHD1A6NEE1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC28.36■■■□□ 2.13
PLEKHD1A6NEE1 AC104109.2-201ENST00000602919 1418 ntBASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 AC009102.3-201ENST00000623118 1491 ntBASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 SART3-203ENST00000546611 1184 ntBASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PLEKHD1A6NEE1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 AC027601.4-201ENST00000611259 610 ntBASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 AC055717.3-201ENST00000622967 595 ntBASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.34■■■□□ 2.13
PLEKHD1A6NEE1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 MTCL1P1-201ENST00000446207 792 ntBASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 FAM197Y3-203ENST00000618346 717 ntBASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PLEKHD1A6NEE1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
PLEKHD1A6NEE1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC28.33■■■□□ 2.12
PLEKHD1A6NEE1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 RPS2P1-201ENST00000434010 821 ntBASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 AC009154.2-201ENST00000621177 724 ntBASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 AC125634.1-201ENST00000438758 1403 ntBASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PLEKHD1A6NEE1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms