Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 CR392000.1-201ENST00000624770 1228 ntBASIC19.67■□□□□ 0.74
RCCD1A6NED2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 KRT16P1-201ENST00000399124 1418 ntBASIC19.67■□□□□ 0.74
RCCD1A6NED2 KRT8P50-201ENST00000562022 1438 ntBASIC19.67■□□□□ 0.74
RCCD1A6NED2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RCCD1A6NED2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RCCD1A6NED2 AL023284.2-201ENST00000405850 579 ntBASIC19.66■□□□□ 0.74
RCCD1A6NED2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RCCD1A6NED2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RCCD1A6NED2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RCCD1A6NED2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.65■□□□□ 0.74
RCCD1A6NED2 GPAT2P1-201ENST00000444924 1672 ntBASIC19.65■□□□□ 0.74
RCCD1A6NED2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 AC099398.1-201ENST00000567919 2776 ntBASIC19.65■□□□□ 0.74
RCCD1A6NED2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RCCD1A6NED2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.65■□□□□ 0.74
RCCD1A6NED2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.64■□□□□ 0.74
RCCD1A6NED2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RCCD1A6NED2 AC108860.2-201ENST00000562760 2183 ntBASIC19.64■□□□□ 0.74
RCCD1A6NED2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.64■□□□□ 0.74
RCCD1A6NED2 PCDHA12-202ENST00000613593 2588 ntBASIC19.64■□□□□ 0.73
RCCD1A6NED2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 FAM207BP-201ENST00000447172 505 ntBASIC19.64■□□□□ 0.73
RCCD1A6NED2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 B3GAT3P1-201ENST00000471720 806 ntBASIC19.64■□□□□ 0.73
RCCD1A6NED2 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 AL031985.4-201ENST00000642138 673 ntBASIC19.64■□□□□ 0.73
RCCD1A6NED2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RCCD1A6NED2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RCCD1A6NED2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 AC009053.2-201ENST00000563701 2365 ntBASIC19.63■□□□□ 0.73
RCCD1A6NED2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms