Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 AC009947.1-201ENST00000444350 727 ntBASIC17.6■□□□□ 0.41
CNOT1A5YKK6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT1A5YKK6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 AC112777.1-201ENST00000540175 1423 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 BCRP1-201ENST00000444246 691 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 YBX1P5-201ENST00000509441 847 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 AC005829.1-201ENST00000570002 483 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 AC027612.4-201ENST00000605371 583 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 AC093028.1-201ENST00000622998 982 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 LINC01521-201ENST00000504184 1943 ntBASIC17.59■□□□□ 0.41
CNOT1A5YKK6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT1A5YKK6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CNOT1A5YKK6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.58■□□□□ 0.4
CNOT1A5YKK6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 RCC2P3-201ENST00000418112 1537 ntBASIC17.58■□□□□ 0.4
CNOT1A5YKK6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 NKAPP1-205ENST00000585790 367 ntBASIC17.58■□□□□ 0.4
CNOT1A5YKK6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT1A5YKK6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 AC112907.3-201ENST00000577781 2400 ntBASIC17.57■□□□□ 0.4
CNOT1A5YKK6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 LINC00565-201ENST00000562710 2331 ntBASIC17.57■□□□□ 0.4
CNOT1A5YKK6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms